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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180720470
ODGJ01049279
178269
Campylobacterota
CAT
Met
>WENV180719270
ODGJ01000471
302166
Campylobacterota
CCA
Trp
>WENV180720150
ODGJ01019259
184068
Campylobacterota
CCT
Arg
>WENV180720734
ODGJ01125008
403821
Campylobacterota
CTC
Glu
>WENV180720924
ODGJ01271832
403821
Campylobacterota
CTC
Glu
>WENV180720163
ODGJ01020400
289226
Campylobacterota
GAC
Val
>WENV180719726
ODGJ01004822
480432
Campylobacterota
GCA
Cys
>WENV180719712
ODGJ01004650
24470
Campylobacterota
GCT
Ser
>WENV180720535
ODGJ01062856
24470
Campylobacterota
GCT
Ser
>WENV180719269
ODGJ01000471
399077
Campylobacterota
GGT
Thr
>WENV180719267
ODGJ01000471
118352
Campylobacterota
GTA
Tyr
>WENV180720617
ODGJ01076939
197122
Campylobacterota
GTG
His
>WENV180720618
ODGJ01076939
235736
Campylobacterota
TCG
Arg
>WENV180720619
ODGJ01076939
187648
Campylobacterota
TCT
Arg
>WENV180719727
ODGJ01004822
30564
Campylobacterota
TGA
Ser
>WENV180720616
ODGJ01076939
156335
Campylobacterota
TGG
Pro
>WENV180720714
ODGJ01112719
354981
Campylobacterota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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