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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180758028
ODHW01004609
411654
Campylobacterota
GCA
Cys
>WENV180758029
ODHW01004609
23937
Campylobacterota
TGA
Ser
>WENV180758364
ODHW01023723
170960
Campylobacterota
TCG
Arg
>WENV180758140
ODHW01007858
193571
Campylobacterota
CAT
Met
>WENV180757661
ODHW01001046
20245
Campylobacterota
GCT
Ser
>WENV180758414
ODHW01037517
238560
Campylobacterota
TTT
Lys
>WENV180757832
ODHW01002315
243184
Campylobacterota
GAC
Val
>WENV180757445
ODHW01000384
243184
Campylobacterota
GAC
Val
>WENV180758362
ODHW01023723
127212
Campylobacterota
TGG
Pro
>WENV180757513
ODHW01000548
338365
Campylobacterota
GGT
Thr
>WENV180758426
ODHW01039861
353400
Campylobacterota
CTC
Glu
>WENV180758415
ODHW01037517
298002
Campylobacterota
>WENV180757844
ODHW01002486
146879
Campylobacterota
CAT
Met
>WENV180757515
ODHW01000554
146879
Campylobacterota
CAT
Met
>WENV180758026
ODHW01004609
397111
Campylobacterota
GCC
Gly
>WENV180758002
ODHW01004184
397111
Campylobacterota
GCC
Gly
>WENV180758027
ODHW01004609
60256
Campylobacterota
TAA
Leu
>WENV180757915
ODHW01003308
379309
Campylobacterota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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