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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180888059
ODMN01000030
411654
Campylobacterota
GCA
Cys
>WENV180889419
ODMN01040894
411654
Campylobacterota
GCA
Cys
>WENV180888300
ODMN01000415
170960
Campylobacterota
TCG
Arg
>WENV180889420
ODMN01040894
44891
Campylobacterota
TGA
Ser
>WENV180888077
ODMN01000039
193571
Campylobacterota
CAT
Met
>WENV180888165
ODMN01000121
20245
Campylobacterota
GCT
Ser
>WENV180889718
ODMN01116168
238560
Campylobacterota
TTT
Lys
>WENV180888189
ODMN01000200
243184
Campylobacterota
GAC
Val
>WENV180888298
ODMN01000415
127212
Campylobacterota
TGG
Pro
>WENV180889037
ODMN01010240
338365
Campylobacterota
GGT
Thr
>WENV180888457
ODMN01001013
338365
Campylobacterota
GGT
Thr
>WENV180888048
ODMN01000024
353400
Campylobacterota
CTC
Glu
>WENV180889719
ODMN01116168
298002
Campylobacterota
>WENV180888625
ODMN01002055
146879
Campylobacterota
CAT
Met
>WENV180889035
ODMN01010240
95644
Campylobacterota
GTA
Tyr
>WENV180889206
ODMN01018155
149516
Campylobacterota
CAT
Met
>WENV180888150
ODMN01000103
397111
Campylobacterota
GCC
Gly
>WENV180888057
ODMN01000030
397111
Campylobacterota
GCC
Gly
>WENV180888058
ODMN01000030
60256
Campylobacterota
TAA
Leu
>WENV180888303
ODMN01000415
379309
Campylobacterota
TTC
Glu
>WENV180889020
ODMN01009928
145013
Campylobacterota
TCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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