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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181103464
OECV01000001
178269
Campylobacterota
CAT
Met
>WENV181103467
OECV01000002
24470
Campylobacterota
GCT
Ser
>WENV181103473
OECV01000003
187648
Campylobacterota
TCT
Arg
>WENV181103471
OECV01000003
197122
Campylobacterota
GTG
His
>WENV181103472
OECV01000003
235736
Campylobacterota
TCG
Arg
>WENV181103470
OECV01000003
156335
Campylobacterota
TGG
Pro
>WENV181103468
OECV01000003
289226
Campylobacterota
GAC
Val
>WENV181103477
OECV01000004
480432
Campylobacterota
GCA
Cys
>WENV181103475
OECV01000004
466210
Campylobacterota
GCC
Gly
>WENV181103478
OECV01000004
30564
Campylobacterota
TGA
Ser
>WENV181103487
OECV01000006
403821
Campylobacterota
CTC
Glu
>WENV181103488
OECV01000007
466210
Campylobacterota
GCC
Gly
>WENV181103496
OECV01000013
302166
Campylobacterota
CCA
Trp
>WENV181103495
OECV01000013
399077
Campylobacterota
GGT
Thr
>WENV181103497
OECV01000013
184068
Campylobacterota
CCT
Arg
>WENV181103493
OECV01000013
118352
Campylobacterota
GTA
Tyr
>WENV181103542
OECV01000123
354981
Campylobacterota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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