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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170311274
CESM01125472
118720
Cyanobacteriota
CAA
Leu
>WENV170311193
CESM01115185
14711
Cyanobacteriota
GCT
Ser
>WENV170310082
CESM01011084
401929
Cyanobacteriota
TTG
Gln
>WENV170310894
CESM01082587
401929
Cyanobacteriota
TTG
Gln
>WENV170311648
CESM01166998
401929
Cyanobacteriota
TTG
Gln
>WENV170310089
CESM01011430
185187
Cyanobacteriota
CCG
Arg
>WENV170311058
CESM01099874
283431
Cyanobacteriota
GTG
His
>WENV170309948
CESM01002439
410287
Cyanobacteriota
CCC
Gly
>WENV170310477
CESM01043696
410287
Cyanobacteriota
CCC
Gly
>WENV170310637
CESM01056390
118688
Cyanobacteriota
TAG
Leu
>WENV170311084
CESM01103498
118688
Cyanobacteriota
TAG
Leu
>WENV170311664
CESM01169416
118688
Cyanobacteriota
TAG
Leu
>WENV170309967
CESM01003705
178673
Cyanobacteriota
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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