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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170732758
LULJ01000852
480623
Cyanobacteriota
TCC
Gly
>WENV170732712
LULJ01000677
118720
Cyanobacteriota
CAA
Leu
>WENV170732645
LULJ01000346
285848
Cyanobacteriota
CAT
Met
>WENV170733133
LULJ01005841
30082
Cyanobacteriota
TGA
Ser
>WENV170732965
LULJ01002687
180925
Cyanobacteriota
ACG
Arg
>WENV170732709
LULJ01000657
401929
Cyanobacteriota
TTG
Gln
>WENV170732643
LULJ01000331
46946
Cyanobacteriota
TAA
Leu
>WENV170733270
LULJ01010666
177109
Cyanobacteriota
CCT
Arg
>WENV170732979
LULJ01002982
283431
Cyanobacteriota
GTG
His
>WENV170732888
LULJ01001907
118688
Cyanobacteriota
TAG
Leu
>WENV170732871
LULJ01001717
177220
Cyanobacteriota
CAT
Met
>WENV170733298
LULJ01011528
219114
Cyanobacteriota
GGG
Pro
>WENV170732852
LULJ01001555
177076
Cyanobacteriota
GTC
Asp
>WENV170732915
LULJ01002124
366263
Cyanobacteriota
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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