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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170746959
LUMB01003516
401934
Cyanobacteriota
GGT
Thr
>WENV170747106
LUMB01014474
401934
Cyanobacteriota
GGT
Thr
>WENV170747103
LUMB01014237
326453
Cyanobacteriota
CGC
Ala
>WENV170746916
LUMB01002159
480623
Cyanobacteriota
TCC
Gly
>WENV170746806
LUMB01000350
176188
Cyanobacteriota
CAT
Met
>WENV170747136
LUMB01017602
118720
Cyanobacteriota
CAA
Leu
>WENV170746783
LUMB01000122
285848
Cyanobacteriota
CAT
Met
>WENV170746846
LUMB01000808
289209
Cyanobacteriota
TGC
Ala
>WENV170747155
LUMB01020447
30082
Cyanobacteriota
TGA
Ser
>WENV170746974
LUMB01003853
180925
Cyanobacteriota
ACG
Arg
>WENV170746787
LUMB01000149
401929
Cyanobacteriota
TTG
Gln
>WENV170747097
LUMB01013637
401929
Cyanobacteriota
TTG
Gln
>WENV170746799
LUMB01000258
46946
Cyanobacteriota
TAA
Leu
>WENV170746873
LUMB01001276
283431
Cyanobacteriota
GTG
His
>WENV170746832
LUMB01000573
118688
Cyanobacteriota
TAG
Leu
>WENV170747119
LUMB01015912
178673
Cyanobacteriota
CCG
Arg
>WENV170746942
LUMB01002992
177220
Cyanobacteriota
CAT
Met
>WENV170746966
LUMB01003654
219114
Cyanobacteriota
GGG
Pro
>WENV170746863
LUMB01001147
177076
Cyanobacteriota
GTC
Asp
>WENV170747089
LUMB01012461
177076
Cyanobacteriota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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