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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180377301
OBON01009046
387387
Cyanobacteriota
GAC
Val
>WENV180377684
OBON01082177
45941
Cyanobacteriota
CGA
Ser
>WENV180377368
OBON01015174
237009
Cyanobacteriota
GGC
Ala
>WENV180377167
OBON01001875
190959
Cyanobacteriota
GTC
Asp
>WENV180377356
OBON01013494
153717
Cyanobacteriota
CAT
Met
>WENV180377593
OBON01055855
58999
Cyanobacteriota
CAG
Leu
>WENV180377194
OBON01002725
148812
Cyanobacteriota
CGG
Pro
>WENV180377403
OBON01019560
11030
Cyanobacteriota
GCT
Ser
>WENV180377551
OBON01043277
339061
Cyanobacteriota
CAC
Val
>WENV180377769
OBON01116838
153271
Cyanobacteriota
TCT
Arg
>WENV180377395
OBON01018636
275071
Cyanobacteriota
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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