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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181410510
OGCI01003477
235681
Cyanobacteriota
CCA
Trp
>WENV181411383
OGCI01023458
152184
Cyanobacteriota
GAC
Val
>WENV181412015
OGCI01070848
239593
Cyanobacteriota
GAA
Phe
>WENV181411533
OGCI01030269
96914
Cyanobacteriota
GTA
Tyr
>WENV181412066
OGCI01077623
167144
Cyanobacteriota
ACG
Arg
>WENV181411062
OGCI01011734
96278
Cyanobacteriota
CAG
Leu
>WENV181411358
OGCI01022154
268835
Cyanobacteriota
GTG
His
>WENV181410939
OGCI01008677
145539
Cyanobacteriota
GTC
Asp
>WENV181411240
OGCI01017413
342477
Cyanobacteriota
TGT
Thr
>WENV181412107
OGCI01082794
253528
Cyanobacteriota
CCA
Trp
>WENV181411363
OGCI01022452
310428
Cyanobacteriota
TGC
Ala
>WENV181410873
OGCI01007491
413212
Cyanobacteriota
TCC
Gly
>WENV181411252
OGCI01017897
95664
Cyanobacteriota
GAG
Leu
>WENV181411677
OGCI01038018
175352
Cyanobacteriota
GAC
Val
>WENV181410779
OGCI01006272
175353
Cyanobacteriota
CAT
Met
>WENV181411146
OGCI01014356
104390
Cyanobacteriota
TAG
Leu
>WENV181412263
OGCI01109611
3346
Cyanobacteriota
GCT
Ser
>WENV181409899
OGCI01000843
339314
Cyanobacteriota
TAC
Val
>WENV181412230
OGCI01101528
47180
Cyanobacteriota
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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