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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180776941
ODIK01251607
183770
Fusobacteriota
GAT
Ile
>WENV180775657
ODIK01002192
187804
Fusobacteriota
GTC
Asp
>WENV180775664
ODIK01002192
187804
Fusobacteriota
GTC
Asp
>WENV180776945
ODIK01254138
141145
Fusobacteriota
>WENV180775656
ODIK01002192
288879
Fusobacteriota
TAC
Val
>WENV180775663
ODIK01002192
288879
Fusobacteriota
TAC
Val
>WENV180776187
ODIK01020967
119283
Fusobacteriota
GTA
Tyr
>WENV180775607
ODIK01001725
280538
Fusobacteriota
TTT
Lys
>WENV180776483
ODIK01046689
280538
Fusobacteriota
TTT
Lys
>WENV180775546
ODIK01001082
184485
Fusobacteriota
GTC
Asp
>WENV180776287
ODIK01027245
184487
Fusobacteriota
TCT
Arg
>WENV180775667
ODIK01002192
183767
Fusobacteriota
TGC
Ala
>WENV180776485
ODIK01046689
156979
Fusobacteriota
CAT
Met
>WENV180776480
ODIK01046689
57899
Fusobacteriota
TAA
Leu
>WENV180775608
ODIK01001725
143640
Fusobacteriota
TAG
Leu
>WENV180775666
ODIK01002192
143640
Fusobacteriota
TAG
Leu
>WENV180776959
ODIK01258896
196958
Fusobacteriota
GAT
Ile
>WENV180775606
ODIK01001725
358658
Fusobacteriota
GTG
His
>WENV180776695
ODIK01097498
289707
Fusobacteriota
TTT
Lys
>WENV180776820
ODIK01159366
292614
Fusobacteriota
TGC
Ala
>WENV180775687
ODIK01002626
187240
Fusobacteriota
TCG
Arg
>WENV180775859
ODIK01005784
288877
Fusobacteriota
GTT
Asn
>WENV180776286
ODIK01027245
292724
Fusobacteriota
TTT
Lys
>WENV180776672
ODIK01090341
292724
Fusobacteriota
TTT
Lys
>WENV180775662
ODIK01002192
407549
Fusobacteriota
TTC
Glu
>WENV180776967
ODIK01262936
407549
Fusobacteriota
TTC
Glu
>WENV180776968
ODIK01262937
407549
Fusobacteriota
TTC
Glu
>WENV180775665
ODIK01002192
288878
Fusobacteriota
TGT
Thr
>WENV180776262
ODIK01026093
288878
Fusobacteriota
TGT
Thr
>WENV180776481
ODIK01046689
214188
Fusobacteriota
CAT
Met
>WENV180776484
ODIK01046689
183769
Fusobacteriota
TCT
Arg
>WENV180775659
ODIK01002192
484173
Fusobacteriota
GCA
Cys
>WENV180775584
ODIK01001458
74687
Fusobacteriota
CAA
Leu
>WENV180776156
ODIK01019289
74687
Fusobacteriota
CAA
Leu
>WENV180776809
ODIK01152186
74687
Fusobacteriota
CAA
Leu
>WENV180775744
ODIK01003726
183772
Fusobacteriota
ACG
Arg
>WENV180775604
ODIK01001725
202720
Fusobacteriota
TGG
Pro
>WENV180775669
ODIK01002192
202720
Fusobacteriota
TGG
Pro
>WENV180775668
ODIK01002192
192090
Fusobacteriota
CAT
Met
>WENV180775661
ODIK01002192
288880
Fusobacteriota
CTT
Lys
>WENV180775991
ODIK01011107
47168
Fusobacteriota
GCT
Ser
>WENV180775470
ODIK01000605
404073
Fusobacteriota
TTG
Gln
>WENV180776984
ODIK01275397
403662
Fusobacteriota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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