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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180992323
ODVP01000917
242888
Fusobacteriota
GTT
Asn
>WENV180992440
ODVP01007556
159267
Fusobacteriota
CAT
Met
>WENV180992447
ODVP01008251
156827
Fusobacteriota
GTC
Asp
>WENV180992448
ODVP01008251
242889
Fusobacteriota
TGT
Thr
>WENV180992449
ODVP01008251
346237
Fusobacteriota
TTC
Glu
>WENV180992518
ODVP01022390
242887
Fusobacteriota
GTG
His
>WENV180992519
ODVP01022390
248546
Fusobacteriota
TTT
Lys
>WENV180992520
ODVP01022390
115931
Fusobacteriota
TAG
Leu
>WENV180992566
ODVP01038092
246241
Fusobacteriota
TGC
Ala
>WENV180992598
ODVP01049672
45759
Fusobacteriota
TAA
Leu
>WENV180992618
ODVP01065348
151857
Fusobacteriota
TCT
Arg
>WENV180992619
ODVP01065348
127801
Fusobacteriota
CAT
Met
>WENV180992645
ODVP01081184
151858
Fusobacteriota
GAT
Ile
>WENV180992651
ODVP01082302
151855
Fusobacteriota
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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