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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181125421
OEFT01098139
183771
Fusobacteriota
TCG
Arg
>WENV181125450
OEFT01116812
187804
Fusobacteriota
GTC
Asp
>WENV181125345
OEFT01058721
141145
Fusobacteriota
>WENV181125449
OEFT01116812
288879
Fusobacteriota
TAC
Val
>WENV181124747
OEFT01001299
289706
Fusobacteriota
GTG
His
>WENV181125488
OEFT01139507
184485
Fusobacteriota
GTC
Asp
>WENV181124884
OEFT01004182
184487
Fusobacteriota
TCT
Arg
>WENV181125343
OEFT01058721
156979
Fusobacteriota
CAT
Met
>WENV181124748
OEFT01001299
289707
Fusobacteriota
TTT
Lys
>WENV181124883
OEFT01004182
289707
Fusobacteriota
TTT
Lys
>WENV181125344
OEFT01058721
407549
Fusobacteriota
TTC
Glu
>WENV181125364
OEFT01070602
288878
Fusobacteriota
TGT
Thr
>WENV181125387
OEFT01083345
214188
Fusobacteriota
CAT
Met
>WENV181125487
OEFT01139507
289739
Fusobacteriota
TAC
Val
>WENV181125273
OEFT01039942
289708
Fusobacteriota
TGT
Thr
>WENV181125447
OEFT01115573
484173
Fusobacteriota
GCA
Cys
>WENV181125304
OEFT01047401
202720
Fusobacteriota
TGG
Pro
>WENV181125365
OEFT01070602
141384
Fusobacteriota
TAG
Leu
>WENV181125386
OEFT01083345
57087
Fusobacteriota
TAA
Leu
>WENV181125030
OEFT01008923
404073
Fusobacteriota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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