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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181153122
OEIA01022593
141145
Fusobacteriota
>WENV181153319
OEIA01051827
183772
Fusobacteriota
ACG
Arg
>WENV181153521
OEIA01112118
183772
Fusobacteriota
ACG
Arg
>WENV181152984
OEIA01012881
156979
Fusobacteriota
CAT
Met
>WENV181152980
OEIA01012881
214188
Fusobacteriota
CAT
Met
>WENV181152914
OEIA01009826
192090
Fusobacteriota
CAT
Met
>WENV181153187
OEIA01027532
183773
Fusobacteriota
CCT
Arg
>WENV181152844
OEIA01007936
288880
Fusobacteriota
CTT
Lys
>WENV181153658
OEIA01205827
183770
Fusobacteriota
GAT
Ile
>WENV181153681
OEIA01226371
196958
Fusobacteriota
GAT
Ile
>WENV181152842
OEIA01007936
484173
Fusobacteriota
GCA
Cys
>WENV181153298
OEIA01046287
119283
Fusobacteriota
GTA
Tyr
>WENV181152840
OEIA01007936
187804
Fusobacteriota
GTC
Asp
>WENV181153358
OEIA01060346
184485
Fusobacteriota
GTC
Asp
>WENV181153022
OEIA01015345
358658
Fusobacteriota
GTG
His
>WENV181153206
OEIA01031164
358658
Fusobacteriota
GTG
His
>WENV181153338
OEIA01055681
288877
Fusobacteriota
GTT
Asn
>WENV181152979
OEIA01012881
57087
Fusobacteriota
TAA
Leu
>WENV181152839
OEIA01007936
288879
Fusobacteriota
TAC
Val
>WENV181153024
OEIA01015345
143640
Fusobacteriota
TAG
Leu
>WENV181153208
OEIA01031164
143640
Fusobacteriota
TAG
Leu
>WENV181153490
OEIA01099451
143640
Fusobacteriota
TAG
Leu
>WENV181153294
OEIA01045865
187240
Fusobacteriota
TCG
Arg
>WENV181153520
OEIA01112118
228619
Fusobacteriota
TCG
Arg
>WENV181153354
OEIA01060346
184487
Fusobacteriota
TCT
Arg
>WENV181152983
OEIA01012881
183769
Fusobacteriota
TCT
Arg
>WENV181152913
OEIA01009826
183767
Fusobacteriota
TGC
Ala
>WENV181153659
OEIA01205827
183767
Fusobacteriota
TGC
Ala
>WENV181153467
OEIA01091866
292614
Fusobacteriota
TGC
Ala
>WENV181153020
OEIA01015345
202720
Fusobacteriota
TGG
Pro
>WENV181153057
OEIA01017659
202720
Fusobacteriota
TGG
Pro
>WENV181153296
OEIA01046287
288878
Fusobacteriota
TGT
Thr
>WENV181153489
OEIA01099451
288878
Fusobacteriota
TGT
Thr
>WENV181152985
OEIA01012881
407549
Fusobacteriota
TTC
Glu
>WENV181153297
OEIA01046287
407549
Fusobacteriota
TTC
Glu
>WENV181153595
OEIA01154138
404073
Fusobacteriota
TTG
Gln
>WENV181152982
OEIA01012881
280538
Fusobacteriota
TTT
Lys
>WENV181153023
OEIA01015345
280538
Fusobacteriota
TTT
Lys
>WENV181153207
OEIA01031164
280538
Fusobacteriota
TTT
Lys
>WENV181153353
OEIA01060346
289707
Fusobacteriota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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