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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181507638
OGGP01000149
141501
Fusobacteriota
TGA
Ser
>WENV181507639
OGGP01000149
21367
Fusobacteriota
GCT
Ser
>WENV181507707
OGGP01000486
288878
Fusobacteriota
TGT
Thr
>WENV181507708
OGGP01000486
140772
Fusobacteriota
TAG
Leu
>WENV181507709
OGGP01000486
175943
Fusobacteriota
CAT
Met
>WENV181507710
OGGP01000492
295075
Fusobacteriota
TAC
Val
>WENV181507711
OGGP01000492
189273
Fusobacteriota
GTC
Asp
>WENV181507734
OGGP01000668
184469
Fusobacteriota
TGG
Pro
>WENV181507738
OGGP01000714
183767
Fusobacteriota
TGC
Ala
>WENV181507746
OGGP01000801
295151
Fusobacteriota
TTT
Lys
>WENV181507748
OGGP01000801
184471
Fusobacteriota
CAT
Met
>WENV181507749
OGGP01000801
407549
Fusobacteriota
TTC
Glu
>WENV181507757
OGGP01000827
362179
Fusobacteriota
GTT
Asn
>WENV181507783
OGGP01001218
407547
Fusobacteriota
TTG
Gln
>WENV181507826
OGGP01002567
184470
Fusobacteriota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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