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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181877469
OGXD01010018
288877
Fusobacteriota
GTT
Asn
>WENV181877512
OGXD01012592
141145
Fusobacteriota
>WENV181877556
OGXD01015886
183767
Fusobacteriota
TGC
Ala
>WENV181877557
OGXD01015886
192090
Fusobacteriota
CAT
Met
>WENV181877579
OGXD01018616
288879
Fusobacteriota
TAC
Val
>WENV181877580
OGXD01018616
187804
Fusobacteriota
GTC
Asp
>WENV181877604
OGXD01021860
214188
Fusobacteriota
CAT
Met
>WENV181877607
OGXD01022153
202720
Fusobacteriota
TGG
Pro
>WENV181877628
OGXD01024781
288878
Fusobacteriota
TGT
Thr
>WENV181877629
OGXD01024781
407549
Fusobacteriota
TTC
Glu
>WENV181877644
OGXD01026963
183771
Fusobacteriota
TCG
Arg
>WENV181877645
OGXD01026963
183772
Fusobacteriota
ACG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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