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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182485422
OIRP01001762
152473
Fusobacteriota
CAT
Met
>WENV182485421
OIRP01001762
156979
Fusobacteriota
TCT
Arg
>WENV182485428
OIRP01001762
242889
Fusobacteriota
TGT
Thr
>WENV182485387
OIRP01000576
248710
Fusobacteriota
GTT
Asn
>WENV182485419
OIRP01001762
267548
Fusobacteriota
TCC
Gly
>WENV182485426
OIRP01001762
248480
Fusobacteriota
TAC
Val
>WENV182485473
OIRP01007690
114254
Fusobacteriota
TGA
Ser
>WENV182485424
OIRP01001762
114254
Fusobacteriota
TGA
Ser
>WENV182485474
OIRP01007690
17193
Fusobacteriota
GCT
Ser
>WENV182485420
OIRP01001762
248546
Fusobacteriota
TTT
Lys
>WENV182485429
OIRP01001762
113605
Fusobacteriota
TAG
Leu
>WENV182485423
OIRP01001762
346237
Fusobacteriota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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