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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182866322
OKRR01000036
75916
Fusobacteriota
GAG
Leu
>WENV182866364
OKRR01000073
407549
Fusobacteriota
TTC
Glu
>WENV182866369
OKRR01000090
101713
Fusobacteriota
CAG
Leu
>WENV182866464
OKRR01000290
141501
Fusobacteriota
TGA
Ser
>WENV182866465
OKRR01000290
21367
Fusobacteriota
GCT
Ser
>WENV182866466
OKRR01000290
189323
Fusobacteriota
ACG
Arg
>WENV182866559
OKRR01000469
75917
Fusobacteriota
CAA
Leu
>WENV182866562
OKRR01000475
407547
Fusobacteriota
TTG
Gln
>WENV182866561
OKRR01000475
184469
Fusobacteriota
TGG
Pro
>WENV182866585
OKRR01000546
407547
Fusobacteriota
TTG
Gln
>WENV182866599
OKRR01000579
175913
Fusobacteriota
TCG
Arg
>WENV182866672
OKRR01000815
288879
Fusobacteriota
TAC
Val
>WENV182866676
OKRR01000815
288878
Fusobacteriota
TGT
Thr
>WENV182866675
OKRR01000815
484173
Fusobacteriota
GCA
Cys
>WENV182866673
OKRR01000815
189273
Fusobacteriota
GTC
Asp
>WENV182866728
OKRR01001070
183767
Fusobacteriota
TGC
Ala
>WENV182866729
OKRR01001070
175943
Fusobacteriota
CAT
Met
>WENV182866744
OKRR01001149
222433
Fusobacteriota
CCT
Arg
>WENV182866747
OKRR01001158
4169
Fusobacteriota
>WENV182866755
OKRR01001161
140772
Fusobacteriota
TAG
Leu
>WENV182866754
OKRR01001161
280538
Fusobacteriota
TTT
Lys
>WENV182866756
OKRR01001161
175943
Fusobacteriota
CAT
Met
>WENV182866752
OKRR01001161
183769
Fusobacteriota
TCT
Arg
>WENV182866750
OKRR01001161
184469
Fusobacteriota
TGG
Pro
>WENV182866753
OKRR01001161
295213
Fusobacteriota
GTG
His
>WENV182866790
OKRR01001455
288877
Fusobacteriota
GTT
Asn
>WENV182866800
OKRR01001504
280538
Fusobacteriota
TTT
Lys
>WENV182866802
OKRR01001504
156979
Fusobacteriota
CAT
Met
>WENV182866798
OKRR01001504
214188
Fusobacteriota
CAT
Met
>WENV182866801
OKRR01001504
183769
Fusobacteriota
TCT
Arg
>WENV182866796
OKRR01001504
183773
Fusobacteriota
CCT
Arg
>WENV182866797
OKRR01001504
57087
Fusobacteriota
TAA
Leu
>WENV182866917
OKRR01002369
202720
Fusobacteriota
TGG
Pro
>WENV182866925
OKRR01002444
57899
Fusobacteriota
TAA
Leu
>WENV182866926
OKRR01002444
184470
Fusobacteriota
CAT
Met
>WENV182867264
OKRR01009473
141199
Fusobacteriota
TGA
Ser
>WENV182867265
OKRR01009473
30524
Fusobacteriota
GCT
Ser
>WENV182867440
OKRR01026584
74687
Fusobacteriota
CAA
Leu
>WENV182867439
OKRR01026584
183772
Fusobacteriota
ACG
Arg
>WENV182867438
OKRR01026584
228619
Fusobacteriota
TCG
Arg
>WENV182867502
OKRR01040549
119283
Fusobacteriota
GTA
Tyr
>WENV182867507
OKRR01042588
288877
Fusobacteriota
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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