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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170218008
CEPY01007232
183804
Gammaproteobacteria
CAT
Met
>WENV170218235
CEPY01049827
517041
Gammaproteobacteria
TCC
Gly
>WENV170218068
CEPY01015175
209464
Gammaproteobacteria
CCG
Arg
>WENV170218041
CEPY01011665
351236
Gammaproteobacteria
TTT
Lys
>WENV170218025
CEPY01009979
181513
Gammaproteobacteria
TGG
Pro
>WENV170217945
CEPY01000052
92638
Gammaproteobacteria
TAA
Leu
>WENV170218155
CEPY01026323
176545
Gammaproteobacteria
CAT
Met
>WENV170218098
CEPY01019850
183701
Gammaproteobacteria
GAT
Ile
>WENV170217977
CEPY01003235
401684
Gammaproteobacteria
CCT
Arg
>WENV170217944
CEPY01000052
481678
Gammaproteobacteria
GCA
Cys
>WENV170218237
CEPY01049843
334421
Gammaproteobacteria
TGT
Thr
>WENV170218185
CEPY01029314
180680
Gammaproteobacteria
GAC
Val
>WENV170218236
CEPY01049827
296672
Gammaproteobacteria
GGT
Thr
>WENV170218234
CEPY01049827
141076
Gammaproteobacteria
GTA
Tyr
>WENV170218183
CEPY01029016
180679
Gammaproteobacteria
CCA
Trp
>WENV170218270
CEPY01056649
179189
Gammaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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