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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170233197
CEQJ01007450
158246
Gammaproteobacteria
GTC
Asp
>WENV170233977
CEQJ01104253
314350
Gammaproteobacteria
CCA
Trp
>WENV170233528
CEQJ01036495
176796
Gammaproteobacteria
GGG
Pro
>WENV170233843
CEQJ01070463
20618
Gammaproteobacteria
GGA
Ser
>WENV170233119
CEQJ01001647
292194
Gammaproteobacteria
GGT
Thr
>WENV170233167
CEQJ01005173
74339
Gammaproteobacteria
GAG
Leu
>WENV170233410
CEQJ01022851
350703
Gammaproteobacteria
TTT
Lys
>WENV170233634
CEQJ01050269
488965
Gammaproteobacteria
GCA
Cys
>WENV170233746
CEQJ01062251
180679
Gammaproteobacteria
CCA
Trp
>WENV170233756
CEQJ01063001
180679
Gammaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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