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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
62 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170249365
CEQS01007973
184230
Gammaproteobacteria
TCT
Arg
>WENV170249350
CEQS01007381
209464
Gammaproteobacteria
CCG
Arg
>WENV170249342
CEQS01006913
178164
Gammaproteobacteria
GAT
Ile
>WENV170249525
CEQS01019530
178164
Gammaproteobacteria
GAT
Ile
>WENV170249662
CEQS01028875
318157
Gammaproteobacteria
GTT
Asn
>WENV170249416
CEQS01011024
184446
Gammaproteobacteria
GAC
Val
>WENV170250355
CEQS01106806
176796
Gammaproteobacteria
GGG
Pro
>WENV170249534
CEQS01020530
178469
Gammaproteobacteria
CAT
Met
>WENV170249305
CEQS01004776
197233
Gammaproteobacteria
CAT
Met
>WENV170249299
CEQS01004437
20407
Gammaproteobacteria
TGA
Ser
>WENV170249315
CEQS01005331
20407
Gammaproteobacteria
TGA
Ser
>WENV170249374
CEQS01008947
20407
Gammaproteobacteria
TGA
Ser
>WENV170249505
CEQS01017940
178538
Gammaproteobacteria
GTC
Asp
>WENV170249952
CEQS01055624
73501
Gammaproteobacteria
GAG
Leu
>WENV170249628
CEQS01026470
140925
Gammaproteobacteria
GTA
Tyr
>WENV170249739
CEQS01034374
178470
Gammaproteobacteria
ACG
Arg
>WENV170249740
CEQS01034374
178470
Gammaproteobacteria
ACG
Arg
>WENV170249279
CEQS01002261
283227
Gammaproteobacteria
TAC
Val
>WENV170249981
CEQS01058102
451238
Gammaproteobacteria
GCC
Gly
>WENV170250215
CEQS01072759
178535
Gammaproteobacteria
CCT
Arg
>WENV170250000
CEQS01059617
20410
Gammaproteobacteria
TGA
Ser
>WENV170249988
CEQS01058356
313852
Gammaproteobacteria
TTC
Glu
>WENV170249654
CEQS01028426
351236
Gammaproteobacteria
TTT
Lys
>WENV170250061
CEQS01064796
178540
Gammaproteobacteria
TGG
Pro
>WENV170249783
CEQS01039183
480629
Gammaproteobacteria
GCA
Cys
>WENV170250454
CEQS01142811
73498
Gammaproteobacteria
CAA
Leu
>WENV170250058
CEQS01064078
443066
Gammaproteobacteria
GGT
Thr
>WENV170249364
CEQS01007973
178473
Gammaproteobacteria
TGG
Pro
>WENV170249363
CEQS01007887
178466
Gammaproteobacteria
CCA
Trp
>WENV170249697
CEQS01031159
286623
Gammaproteobacteria
GTT
Asn
>WENV170249369
CEQS01008606
401684
Gammaproteobacteria
CCT
Arg
>WENV170250224
CEQS01073242
178169
Gammaproteobacteria
GAC
Val
>WENV170249280
CEQS01002261
283226
Gammaproteobacteria
TAC
Val
>WENV170249281
CEQS01002261
283226
Gammaproteobacteria
TAC
Val
>WENV170249551
CEQS01021993
283226
Gammaproteobacteria
TAC
Val
>WENV170249313
CEQS01005169
232119
Gammaproteobacteria
ACG
Arg
>WENV170249765
CEQS01036962
74048
Gammaproteobacteria
CAA
Leu
>WENV170249769
CEQS01037649
481678
Gammaproteobacteria
GCA
Cys
>WENV170250549
CEQS01162248
29724
Gammaproteobacteria
GCT
Ser
>WENV170249277
CEQS01002016
306288
Gammaproteobacteria
GCC
Gly
>WENV170250095
CEQS01067182
334421
Gammaproteobacteria
TGT
Thr
>WENV170249549
CEQS01021993
282683
Gammaproteobacteria
GGC
Ala
>WENV170250153
CEQS01071085
118414
Gammaproteobacteria
TAG
Leu
>WENV170249613
CEQS01025402
29695
Gammaproteobacteria
GGA
Ser
>WENV170250470
CEQS01146883
178532
Gammaproteobacteria
CCG
Arg
>WENV170249950
CEQS01055154
296672
Gammaproteobacteria
GGT
Thr
>WENV170249750
CEQS01035117
118207
Gammaproteobacteria
GAG
Leu
>WENV170249592
CEQS01022991
180678
Gammaproteobacteria
CCG
Arg
>WENV170249253
CEQS01000765
362336
Gammaproteobacteria
TTT
Lys
>WENV170249428
CEQS01012236
283224
Gammaproteobacteria
GAA
Phe
>WENV170249594
CEQS01023067
400372
Gammaproteobacteria
CCT
Arg
>WENV170249490
CEQS01017291
281791
Gammaproteobacteria
GTG
His
>WENV170250125
CEQS01068984
176518
Gammaproteobacteria
CAT
Met
>WENV170249300
CEQS01004437
21947
Gammaproteobacteria
TGA
Ser
>WENV170249948
CEQS01055154
141076
Gammaproteobacteria
GTA
Tyr
>WENV170249965
CEQS01056888
282902
Gammaproteobacteria
TGT
Thr
>WENV170250272
CEQS01076468
140861
Gammaproteobacteria
GTA
Tyr
>WENV170249392
CEQS01009710
118341
Gammaproteobacteria
CAA
Leu
>WENV170249829
CEQS01042019
400928
Gammaproteobacteria
>WENV170249685
CEQS01029872
178533
Gammaproteobacteria
GGG
Pro
>WENV170249738
CEQS01034315
180679
Gammaproteobacteria
CCA
Trp
>WENV170250161
CEQS01071463
179189
Gammaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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