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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170260396
CEQZ01018206
331330
Gammaproteobacteria
TAC
Val
>WENV170260271
CEQZ01005955
118218
Gammaproteobacteria
TAG
Leu
>WENV170260265
CEQZ01005346
176662
Gammaproteobacteria
ACG
Arg
>WENV170260261
CEQZ01004835
178175
Gammaproteobacteria
ACG
Arg
>WENV170260340
CEQZ01014263
197233
Gammaproteobacteria
CAT
Met
>WENV170260463
CEQZ01047591
178777
Gammaproteobacteria
CCG
Arg
>WENV170260216
CEQZ01001862
178538
Gammaproteobacteria
GTC
Asp
>WENV170260279
CEQZ01006401
73501
Gammaproteobacteria
GAG
Leu
>WENV170260214
CEQZ01001858
329164
Gammaproteobacteria
TTT
Lys
>WENV170260201
CEQZ01001060
176663
Gammaproteobacteria
GGG
Pro
>WENV170260186
CEQZ01000136
178540
Gammaproteobacteria
TGG
Pro
>WENV170260333
CEQZ01013471
178541
Gammaproteobacteria
CGG
Pro
>WENV170260452
CEQZ01044269
178543
Gammaproteobacteria
GGG
Pro
>WENV170260338
CEQZ01014147
280812
Gammaproteobacteria
GAA
Phe
>WENV170260387
CEQZ01018192
455280
Gammaproteobacteria
TTG
Gln
>WENV170260478
CEQZ01051161
178549
Gammaproteobacteria
GTT
Asn
>WENV170260267
CEQZ01005558
178532
Gammaproteobacteria
CCG
Arg
>WENV170260240
CEQZ01002856
89769
Gammaproteobacteria
CAG
Leu
>WENV170260250
CEQZ01003275
371341
Gammaproteobacteria
GTT
Asn
>WENV170260251
CEQZ01003275
371341
Gammaproteobacteria
GTT
Asn
>WENV170260281
CEQZ01006436
371341
Gammaproteobacteria
GTT
Asn
>WENV170260230
CEQZ01002526
230011
Gammaproteobacteria
ACG
Arg
>WENV170260231
CEQZ01002526
230011
Gammaproteobacteria
ACG
Arg
>WENV170260198
CEQZ01000801
8667
Gammaproteobacteria
GCT
Ser
>WENV170260471
CEQZ01049703
201377
Gammaproteobacteria
TGG
Pro
>WENV170260400
CEQZ01019140
315775
Gammaproteobacteria
TGT
Thr
>WENV170260222
CEQZ01002121
331059
Gammaproteobacteria
>WENV170260241
CEQZ01002956
140861
Gammaproteobacteria
GTA
Tyr
>WENV170260339
CEQZ01014217
178533
Gammaproteobacteria
GGG
Pro
>WENV170260183
CEQZ01000058
282893
Gammaproteobacteria
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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