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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170740234
LULR01003327
235887
Gammaproteobacteria
GTG
His
>WENV170739939
LULR01000038
237766
Gammaproteobacteria
TAC
Val
>WENV170739940
LULR01000038
237766
Gammaproteobacteria
TAC
Val
>WENV170740324
LULR01005496
277725
Gammaproteobacteria
TAC
Val
>WENV170739965
LULR01000072
95985
Gammaproteobacteria
TAG
Leu
>WENV170740050
LULR01000498
145368
Gammaproteobacteria
CCT
Arg
>WENV170740402
LULR01008122
283668
Gammaproteobacteria
TTT
Lys
>WENV170740389
LULR01007744
58822
Gammaproteobacteria
CAA
Leu
>WENV170739927
LULR01000014
59177
Gammaproteobacteria
TAA
Leu
>WENV170740434
LULR01009135
145367
Gammaproteobacteria
GGG
Pro
>WENV170740539
LULR01015161
235452
Gammaproteobacteria
GAA
Phe
>WENV170739948
LULR01000048
235452
Gammaproteobacteria
GAA
Phe
>WENV170740297
LULR01004759
198730
Gammaproteobacteria
GAC
Val
>WENV170740636
LULR01023505
149036
Gammaproteobacteria
CCA
Trp
>WENV170740008
LULR01000214
145366
Gammaproteobacteria
ACG
Arg
>WENV170739923
LULR01000014
147122
Gammaproteobacteria
GGG
Pro
>WENV170740094
LULR01000949
145369
Gammaproteobacteria
CGG
Pro
>WENV170740196
LULR01002615
98737
Gammaproteobacteria
GAG
Leu
>WENV170739961
LULR01000070
6976
Gammaproteobacteria
GCT
Ser
>WENV170740277
LULR01004172
95750
Gammaproteobacteria
TAG
Leu
>WENV170740075
LULR01000681
145237
Gammaproteobacteria
CAT
Met
>WENV170740271
LULR01004009
247974
Gammaproteobacteria
CCA
Trp
>WENV170739964
LULR01000072
147123
Gammaproteobacteria
CAT
Met
>WENV170740063
LULR01000574
235886
Gammaproteobacteria
TTC
Glu
>WENV170740003
LULR01000192
235886
Gammaproteobacteria
TTC
Glu
>WENV170739926
LULR01000014
412230
Gammaproteobacteria
GCA
Cys
>WENV170739951
LULR01000057
240082
Gammaproteobacteria
TTT
Lys
>WENV170740119
LULR01001277
243921
Gammaproteobacteria
TTT
Lys
>WENV170739966
LULR01000072
339623
Gammaproteobacteria
TTG
Gln
>WENV170739950
LULR01000055
163580
Gammaproteobacteria
GAC
Val
>WENV170740232
LULR01003327
198797
Gammaproteobacteria
TGG
Pro
>WENV170739952
LULR01000057
45152
Gammaproteobacteria
GGA
Ser
>WENV170740110
LULR01001117
20500
Gammaproteobacteria
GGA
Ser
>WENV170740659
LULR01026184
95603
Gammaproteobacteria
TAG
Leu
>WENV170739941
LULR01000038
147127
Gammaproteobacteria
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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