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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180143624
OATY01000017
402723
Gammaproteobacteria
TTG
Gln
>WENV180143625
OATY01000017
402723
Gammaproteobacteria
TTG
Gln
>WENV180143602
OATY01000010
185120
Gammaproteobacteria
GGG
Pro
>WENV180143637
OATY01000019
34674
Gammaproteobacteria
GGA
Ser
>WENV180143638
OATY01000019
34674
Gammaproteobacteria
GGA
Ser
>WENV180143588
OATY01000004
57296
Gammaproteobacteria
TGA
Ser
>WENV180143607
OATY01000014
128131
Gammaproteobacteria
GTA
Tyr
>WENV180143608
OATY01000014
128131
Gammaproteobacteria
GTA
Tyr
>WENV180143722
OATY01000116
128131
Gammaproteobacteria
GTA
Tyr
>WENV180143962
OATY01012209
175980
Gammaproteobacteria
CAT
Met
>WENV180143599
OATY01000008
118088
Gammaproteobacteria
CAA
Leu
>WENV180143732
OATY01000160
175986
Gammaproteobacteria
ACG
Arg
>WENV180143733
OATY01000160
175986
Gammaproteobacteria
ACG
Arg
>WENV180143814
OATY01000357
175986
Gammaproteobacteria
ACG
Arg
>WENV180143952
OATY01010643
175986
Gammaproteobacteria
ACG
Arg
>WENV180143721
OATY01000116
281352
Gammaproteobacteria
TGT
Thr
>WENV180143600
OATY01000009
439883
Gammaproteobacteria
CCT
Arg
>WENV180143961
OATY01012209
398899
Gammaproteobacteria
TTG
Gln
>WENV180143621
OATY01000017
179582
Gammaproteobacteria
TCT
Arg
>WENV180143966
OATY01015582
4023
Gammaproteobacteria
>WENV180143598
OATY01000007
57067
Gammaproteobacteria
TGA
Ser
>WENV180143658
OATY01000032
284184
Gammaproteobacteria
CTT
Lys
>WENV180143641
OATY01000020
74992
Gammaproteobacteria
TAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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