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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180225995
OBBP01014882
3276
Gammaproteobacteria
>WENV180226068
OBBP01038587
4379
Gammaproteobacteria
>WENV180225993
OBBP01014778
90409
Gammaproteobacteria
CAA
Leu
>WENV180225913
OBBP01002351
268376
Gammaproteobacteria
CTT
Lys
>WENV180225910
OBBP01001962
147498
Gammaproteobacteria
GAC
Val
>WENV180225932
OBBP01003887
81880
Gammaproteobacteria
GAG
Leu
>WENV180226185
OBBP01081969
417674
Gammaproteobacteria
GCA
Cys
>WENV180226227
OBBP01110192
3247
Gammaproteobacteria
GCT
Ser
>WENV180226038
OBBP01028134
30640
Gammaproteobacteria
GGA
Ser
>WENV180225889
OBBP01001100
316532
Gammaproteobacteria
GTG
His
>WENV180226186
OBBP01081969
70677
Gammaproteobacteria
TAA
Leu
>WENV180225957
OBBP01007050
24813
Gammaproteobacteria
TGA
Ser
>WENV180225954
OBBP01006540
397091
Gammaproteobacteria
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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