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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180394227
OBPS01000001
145317
Gammaproteobacteria
ACG
Arg
>WENV180394480
OBPS01008875
154268
Gammaproteobacteria
ACG
Arg
>WENV180394230
OBPS01000001
147647
Gammaproteobacteria
CAT
Met
>WENV180394231
OBPS01000002
247088
Gammaproteobacteria
CCA
Trp
>WENV180394291
OBPS01000551
183605
Gammaproteobacteria
CCG
Arg
>WENV180394557
OBPS01017038
148148
Gammaproteobacteria
GAC
Val
>WENV180394483
OBPS01009101
148148
Gammaproteobacteria
GAC
Val
>WENV180394433
OBPS01005251
163882
Gammaproteobacteria
GAC
Val
>WENV180394901
OBPS01163743
273942
Gammaproteobacteria
GCC
Gly
>WENV180394439
OBPS01005358
46594
Gammaproteobacteria
GGA
Ser
>WENV180394939
OBPS01184756
322642
Gammaproteobacteria
GGT
Thr
>WENV180394269
OBPS01000216
322642
Gammaproteobacteria
GGT
Thr
>WENV180394911
OBPS01172858
115067
Gammaproteobacteria
GTA
Tyr
>WENV180394486
OBPS01009333
319098
Gammaproteobacteria
TAC
Val
>WENV180394397
OBPS01003661
185151
Gammaproteobacteria
TCT
Arg
>WENV180394534
OBPS01013375
202944
Gammaproteobacteria
TGG
Pro
>WENV180394395
OBPS01003661
198797
Gammaproteobacteria
TGG
Pro
>WENV180394307
OBPS01000908
237421
Gammaproteobacteria
TGT
Thr
>WENV180394944
OBPS01189365
292565
Gammaproteobacteria
TTC
Glu
>WENV180394937
OBPS01183341
292565
Gammaproteobacteria
TTC
Glu
>WENV180394344
OBPS01001654
292565
Gammaproteobacteria
TTC
Glu
>WENV180394440
OBPS01005426
245602
Gammaproteobacteria
TTT
Lys
>WENV180394236
OBPS01000012
236248
Gammaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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