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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180459849
OBXY01000017
4023
Gammaproteobacteria
>WENV180459852
OBXY01000017
184275
Gammaproteobacteria
ACG
Arg
>WENV180459872
OBXY01000061
176541
Gammaproteobacteria
CAT
Met
>WENV180459871
OBXY01000058
293263
Gammaproteobacteria
CTT
Lys
>WENV180459850
OBXY01000017
5699
Gammaproteobacteria
GCT
Ser
>WENV180459855
OBXY01000030
31109
Gammaproteobacteria
GGA
Ser
>WENV180459824
OBXY01000001
76276
Gammaproteobacteria
TAA
Leu
>WENV180459830
OBXY01000001
76276
Gammaproteobacteria
TAA
Leu
>WENV180459873
OBXY01000061
121754
Gammaproteobacteria
TAG
Leu
>WENV180459874
OBXY01000061
401175
Gammaproteobacteria
TTG
Gln
>WENV180459875
OBXY01000061
401175
Gammaproteobacteria
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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