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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181070452
OEAE01001754
109178
Gammaproteobacteria
CAA
Leu
>WENV181070564
OEAE01003392
86464
Gammaproteobacteria
TAA
Leu
>WENV181070600
OEAE01003817
86464
Gammaproteobacteria
TAA
Leu
>WENV181070802
OEAE01010653
86464
Gammaproteobacteria
TAA
Leu
>WENV181070384
OEAE01001136
284044
Gammaproteobacteria
TTC
Glu
>WENV181070378
OEAE01001126
5699
Gammaproteobacteria
GCT
Ser
>WENV181070595
OEAE01003788
5699
Gammaproteobacteria
GCT
Ser
>WENV181070688
OEAE01005980
121754
Gammaproteobacteria
TAG
Leu
>WENV181070751
OEAE01008181
31109
Gammaproteobacteria
GGA
Ser
>WENV181070689
OEAE01005980
401175
Gammaproteobacteria
TTG
Gln
>WENV181070690
OEAE01005980
401175
Gammaproteobacteria
TTG
Gln
>WENV181070858
OEAE01015874
4023
Gammaproteobacteria
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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