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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181136208
OEGI01001531
4023
Gammaproteobacteria
>WENV181135828
OEGI01000003
109178
Gammaproteobacteria
CAA
Leu
>WENV181136390
OEGI01005079
176446
Gammaproteobacteria
CAT
Met
>WENV181136207
OEGI01001524
178975
Gammaproteobacteria
CTT
Lys
>WENV181135872
OEGI01000018
5699
Gammaproteobacteria
GCT
Ser
>WENV181135847
OEGI01000010
31109
Gammaproteobacteria
GGA
Ser
>WENV181136425
OEGI01006120
127466
Gammaproteobacteria
TAG
Leu
>WENV181136728
OEGI01039196
284044
Gammaproteobacteria
TTC
Glu
>WENV181135824
OEGI01000003
401175
Gammaproteobacteria
TTG
Gln
>WENV181135825
OEGI01000003
401175
Gammaproteobacteria
TTG
Gln
>WENV181135826
OEGI01000003
401175
Gammaproteobacteria
TTG
Gln
>WENV181136426
OEGI01006120
463989
Gammaproteobacteria
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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