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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181196250
OEQX01000011
166649
Gammaproteobacteria
CCT
Arg
>WENV181196275
OEQX01000045
144789
Gammaproteobacteria
GGG
Pro
>WENV181196278
OEQX01000061
144790
Gammaproteobacteria
CGG
Pro
>WENV181196286
OEQX01000085
146661
Gammaproteobacteria
CAT
Met
>WENV181196287
OEQX01000086
144789
Gammaproteobacteria
GGG
Pro
>WENV181196288
OEQX01000088
148441
Gammaproteobacteria
TGG
Pro
>WENV181196293
OEQX01000122
314528
Gammaproteobacteria
CCT
Arg
>WENV181196318
OEQX01000203
6883
Gammaproteobacteria
GCT
Ser
>WENV181196324
OEQX01000228
144788
Gammaproteobacteria
>WENV181196325
OEQX01000281
52727
Gammaproteobacteria
GGA
Ser
>WENV181196332
OEQX01000300
235317
Gammaproteobacteria
GGT
Thr
>WENV181196335
OEQX01000314
340342
Gammaproteobacteria
TTG
Gln
>WENV181196336
OEQX01000314
144784
Gammaproteobacteria
CAT
Met
>WENV181196337
OEQX01000314
113614
Gammaproteobacteria
TAG
Leu
>WENV181196338
OEQX01000335
83458
Gammaproteobacteria
CAG
Leu
>WENV181196340
OEQX01000335
83458
Gammaproteobacteria
CAG
Leu
>WENV181196342
OEQX01000340
237174
Gammaproteobacteria
CGT
Thr
>WENV181196345
OEQX01000356
307499
Gammaproteobacteria
GAA
Phe
>WENV181196351
OEQX01000416
147100
Gammaproteobacteria
TCT
Arg
>WENV181196373
OEQX01000663
152286
Gammaproteobacteria
GAC
Val
>WENV181196377
OEQX01000695
144792
Gammaproteobacteria
GAC
Val
>WENV181196378
OEQX01000695
144793
Gammaproteobacteria
GAC
Val
>WENV181196433
OEQX01006764
195524
Gammaproteobacteria
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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