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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181200345
OERK01000517
176039
Gammaproteobacteria
>WENV181200308
OERK01000252
99863
Gammaproteobacteria
CAG
Leu
>WENV181200325
OERK01000329
176035
Gammaproteobacteria
CAT
Met
>WENV181200300
OERK01000231
496392
Gammaproteobacteria
CCC
Gly
>WENV181200271
OERK01000117
177970
Gammaproteobacteria
CCT
Arg
>WENV181200319
OERK01000301
176041
Gammaproteobacteria
CGG
Pro
>WENV181200337
OERK01000396
282633
Gammaproteobacteria
CGT
Thr
>WENV181200278
OERK01000138
176044
Gammaproteobacteria
GAC
Val
>WENV181200279
OERK01000138
176044
Gammaproteobacteria
GAC
Val
>WENV181200230
OERK01000025
184266
Gammaproteobacteria
GAC
Val
>WENV181200277
OERK01000138
176043
Gammaproteobacteria
GAC
Val
>WENV181200344
OERK01000517
8505
Gammaproteobacteria
GCT
Ser
>WENV181200266
OERK01000100
176040
Gammaproteobacteria
GGG
Pro
>WENV181200299
OERK01000222
176040
Gammaproteobacteria
GGG
Pro
>WENV181200333
OERK01000375
280672
Gammaproteobacteria
GGT
Thr
>WENV181200334
OERK01000375
280672
Gammaproteobacteria
GGT
Thr
>WENV181200409
OERK01005232
296684
Gammaproteobacteria
GGT
Thr
>WENV181200321
OERK01000318
280668
Gammaproteobacteria
GTT
Asn
>WENV181200331
OERK01000364
349691
Gammaproteobacteria
TAC
Val
>WENV181200326
OERK01000329
140781
Gammaproteobacteria
TAG
Leu
>WENV181200456
OERK01008666
184629
Gammaproteobacteria
TCT
Arg
>WENV181200363
OERK01001018
178522
Gammaproteobacteria
TCT
Arg
>WENV181200315
OERK01000273
56092
Gammaproteobacteria
TGA
Ser
>WENV181200332
OERK01000370
56092
Gammaproteobacteria
TGA
Ser
>WENV181200233
OERK01000029
180042
Gammaproteobacteria
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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