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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
58 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181233515
OFET01000002
147160
Gammaproteobacteria
ACG
Arg
>WENV181233516
OFET01000002
147160
Gammaproteobacteria
ACG
Arg
>WENV181234150
OFET01013031
145366
Gammaproteobacteria
ACG
Arg
>WENV181233739
OFET01000068
58822
Gammaproteobacteria
CAA
Leu
>WENV181233533
OFET01000002
59175
Gammaproteobacteria
CAG
Leu
>WENV181233766
OFET01000080
199984
Gammaproteobacteria
CAT
Met
>WENV181233753
OFET01000070
199984
Gammaproteobacteria
CAT
Met
>WENV181234059
OFET01001575
145196
Gammaproteobacteria
CAT
Met
>WENV181233696
OFET01000048
149073
Gammaproteobacteria
CAT
Met
>WENV181233645
OFET01000023
147328
Gammaproteobacteria
CCG
Arg
>WENV181233663
OFET01000031
150183
Gammaproteobacteria
CCG
Arg
>WENV181233790
OFET01000106
145368
Gammaproteobacteria
CCT
Arg
>WENV181233650
OFET01000026
147114
Gammaproteobacteria
CCT
Arg
>WENV181233776
OFET01000093
145369
Gammaproteobacteria
CGG
Pro
>WENV181233683
OFET01000039
147120
Gammaproteobacteria
CGG
Pro
>WENV181233817
OFET01000118
237438
Gammaproteobacteria
GAA
Phe
>WENV181233953
OFET01000419
198730
Gammaproteobacteria
GAC
Val
>WENV181233553
OFET01000005
198730
Gammaproteobacteria
GAC
Val
>WENV181233524
OFET01000002
193200
Gammaproteobacteria
GAC
Val
>WENV181233898
OFET01000241
147118
Gammaproteobacteria
GAC
Val
>WENV181233626
OFET01000017
98737
Gammaproteobacteria
GAG
Leu
>WENV181234122
OFET01005222
193275
Gammaproteobacteria
GAT
Ile
>WENV181233527
OFET01000002
412230
Gammaproteobacteria
GCA
Cys
>WENV181233552
OFET01000005
411735
Gammaproteobacteria
GCA
Cys
>WENV181233597
OFET01000012
238510
Gammaproteobacteria
GCC
Gly
>WENV181233526
OFET01000002
238510
Gammaproteobacteria
GCC
Gly
>WENV181233514
OFET01000002
8043
Gammaproteobacteria
GCT
Ser
>WENV181234077
OFET01001977
20025
Gammaproteobacteria
GGA
Ser
>WENV181233870
OFET01000172
47425
Gammaproteobacteria
GGA
Ser
>WENV181233767
OFET01000080
152460
Gammaproteobacteria
GGG
Pro
>WENV181234006
OFET01000723
145367
Gammaproteobacteria
GGG
Pro
>WENV181233523
OFET01000002
147122
Gammaproteobacteria
GGG
Pro
>WENV181234035
OFET01001043
113631
Gammaproteobacteria
GTA
Tyr
>WENV181233787
OFET01000105
101028
Gammaproteobacteria
GTA
Tyr
>WENV181233679
OFET01000039
113688
Gammaproteobacteria
GTA
Tyr
>WENV181233798
OFET01000110
147117
Gammaproteobacteria
GTC
Asp
>WENV181233565
OFET01000007
235887
Gammaproteobacteria
GTG
His
>WENV181233848
OFET01000147
270709
Gammaproteobacteria
GTG
His
>WENV181233746
OFET01000070
268812
Gammaproteobacteria
GTT
Asn
>WENV181233534
OFET01000002
147127
Gammaproteobacteria
GTT
Asn
>WENV181233528
OFET01000002
59440
Gammaproteobacteria
TAA
Leu
>WENV181233559
OFET01000007
238499
Gammaproteobacteria
TAC
Val
>WENV181233509
OFET01000002
238761
Gammaproteobacteria
TAC
Val
>WENV181233508
OFET01000002
238761
Gammaproteobacteria
TAC
Val
>WENV181233530
OFET01000002
97031
Gammaproteobacteria
TAG
Leu
>WENV181234036
OFET01001043
338534
Gammaproteobacteria
TCC
Gly
>WENV181233788
OFET01000105
346720
Gammaproteobacteria
TCC
Gly
>WENV181233548
OFET01000005
16284
Gammaproteobacteria
TGA
Ser
>WENV181233863
OFET01000171
16396
Gammaproteobacteria
TGA
Ser
>WENV181234143
OFET01010593
279906
Gammaproteobacteria
TGC
Ala
>WENV181233828
OFET01000129
202944
Gammaproteobacteria
TGG
Pro
>WENV181233563
OFET01000007
198797
Gammaproteobacteria
TGG
Pro
>WENV181233864
OFET01000172
283840
Gammaproteobacteria
TTC
Glu
>WENV181233736
OFET01000068
235886
Gammaproteobacteria
TTC
Glu
>WENV181233562
OFET01000007
235886
Gammaproteobacteria
TTC
Glu
>WENV181233569
OFET01000007
243921
Gammaproteobacteria
TTT
Lys
>WENV181233568
OFET01000007
243921
Gammaproteobacteria
TTT
Lys
>WENV181233567
OFET01000007
243921
Gammaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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