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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181483404
OGFK01003842
144790
Gammaproteobacteria
CGG
Pro
>WENV181483405
OGFK01003860
6883
Gammaproteobacteria
GCT
Ser
>WENV181483456
OGFK01004978
144793
Gammaproteobacteria
GAC
Val
>WENV181483455
OGFK01004978
144793
Gammaproteobacteria
GAC
Val
>WENV181483454
OGFK01004978
144792
Gammaproteobacteria
GAC
Val
>WENV181483462
OGFK01005289
148441
Gammaproteobacteria
TGG
Pro
>WENV181483482
OGFK01005781
162284
Gammaproteobacteria
CCA
Trp
>WENV181483507
OGFK01006775
235317
Gammaproteobacteria
GGT
Thr
>WENV181483543
OGFK01008533
3276
Gammaproteobacteria
>WENV181483617
OGFK01011216
146661
Gammaproteobacteria
CAT
Met
>WENV181483620
OGFK01011378
144789
Gammaproteobacteria
GGG
Pro
>WENV181483633
OGFK01012350
90409
Gammaproteobacteria
CAA
Leu
>WENV181483651
OGFK01013927
203133
Gammaproteobacteria
TCT
Arg
>WENV181483661
OGFK01015038
30640
Gammaproteobacteria
GGA
Ser
>WENV181483668
OGFK01015529
268376
Gammaproteobacteria
CTT
Lys
>WENV181483685
OGFK01016910
81880
Gammaproteobacteria
GAG
Leu
>WENV181483690
OGFK01017119
147159
Gammaproteobacteria
>WENV181483708
OGFK01019160
52727
Gammaproteobacteria
GGA
Ser
>WENV181483738
OGFK01023638
146612
Gammaproteobacteria
CCT
Arg
>WENV181483789
OGFK01035821
237174
Gammaproteobacteria
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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