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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181561066
OGJD01000129
81880
Gammaproteobacteria
GAG
Leu
>WENV181561493
OGJD01005378
81880
Gammaproteobacteria
GAG
Leu
>WENV181561388
OGJD01001755
152135
Gammaproteobacteria
GAC
Val
>WENV181561438
OGJD01002539
152600
Gammaproteobacteria
TCT
Arg
>WENV181561062
OGJD01000121
145364
Gammaproteobacteria
GGG
Pro
>WENV181561065
OGJD01000128
145364
Gammaproteobacteria
GGG
Pro
>WENV181561343
OGJD01001406
145364
Gammaproteobacteria
GGG
Pro
>WENV181561526
OGJD01007753
3276
Gammaproteobacteria
>WENV181560983
OGJD01000036
145168
Gammaproteobacteria
CAT
Met
>WENV181560984
OGJD01000036
23665
Gammaproteobacteria
>WENV181561546
OGJD01011533
238446
Gammaproteobacteria
>WENV181561437
OGJD01002539
144928
Gammaproteobacteria
TCG
Arg
>WENV181561289
OGJD01000884
3278
Gammaproteobacteria
>WENV181561370
OGJD01001503
240084
Gammaproteobacteria
GGT
Thr
>WENV181561560
OGJD01012782
145527
Gammaproteobacteria
TCT
Arg
>WENV181561047
OGJD01000099
147498
Gammaproteobacteria
GAC
Val
>WENV181561299
OGJD01000960
148834
Gammaproteobacteria
CAT
Met
>WENV181561517
OGJD01007048
340341
Gammaproteobacteria
TCC
Gly
>WENV181561225
OGJD01000565
147761
Gammaproteobacteria
TGG
Pro
>WENV181561271
OGJD01000755
97795
Gammaproteobacteria
GTA
Tyr
>WENV181561160
OGJD01000318
147499
Gammaproteobacteria
CTT
Lys
>WENV181561390
OGJD01001784
145502
Gammaproteobacteria
TCT
Arg
>WENV181561509
OGJD01006530
237306
Gammaproteobacteria
GAA
Phe
>WENV181561121
OGJD01000227
237306
Gammaproteobacteria
GAA
Phe
>WENV181561014
OGJD01000065
147159
Gammaproteobacteria
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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