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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181801759
OGSC01000043
148835
Gammaproteobacteria
CAT
Met
>WENV181801892
OGSC01000266
148835
Gammaproteobacteria
CAT
Met
>WENV181801809
OGSC01000095
65387
Gammaproteobacteria
CAG
Leu
>WENV181802039
OGSC01001592
65387
Gammaproteobacteria
CAG
Leu
>WENV181802108
OGSC01003392
338240
Gammaproteobacteria
>WENV181801722
OGSC01000017
145364
Gammaproteobacteria
GGG
Pro
>WENV181801760
OGSC01000043
339937
Gammaproteobacteria
CTG
Gln
>WENV181801764
OGSC01000051
23431
Gammaproteobacteria
CGA
Ser
>WENV181801754
OGSC01000039
147100
Gammaproteobacteria
TCT
Arg
>WENV181801761
OGSC01000043
412407
Gammaproteobacteria
CTG
Gln
>WENV181802080
OGSC01002478
315638
Gammaproteobacteria
TAC
Val
>WENV181801832
OGSC01000140
315638
Gammaproteobacteria
TAC
Val
>WENV181801670
OGSC01000002
3850
Gammaproteobacteria
>WENV181801716
OGSC01000011
314760
Gammaproteobacteria
CAT
Met
>WENV181802126
OGSC01003523
163555
Gammaproteobacteria
TCT
Arg
>WENV181801720
OGSC01000016
237467
Gammaproteobacteria
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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