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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182551601
OJCE01001702
180679
Gammaproteobacteria
CCA
Trp
>WENV182551602
OJCE01002061
283224
Gammaproteobacteria
GAA
Phe
>WENV182551580
OJCE01000128
313571
Gammaproteobacteria
GCC
Gly
>WENV182551600
OJCE01001491
281276
Gammaproteobacteria
GGT
Thr
>WENV182551606
OJCE01002061
317785
Gammaproteobacteria
GGT
Thr
>WENV182551604
OJCE01002061
118205
Gammaproteobacteria
GTA
Tyr
>WENV182551617
OJCE01004046
283226
Gammaproteobacteria
TAC
Val
>WENV182551599
OJCE01001491
399250
Gammaproteobacteria
TCC
Gly
>WENV182551603
OJCE01002061
283225
Gammaproteobacteria
TGT
Thr
>WENV182551609
OJCE01002341
362004
Gammaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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