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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182579717
OJGT01000019
238438
Gammaproteobacteria
>WENV182579682
OJGT01000003
193276
Gammaproteobacteria
ACG
Arg
>WENV182579691
OJGT01000007
149066
Gammaproteobacteria
CAT
Met
>WENV182579693
OJGT01000007
149065
Gammaproteobacteria
CCA
Trp
>WENV182579741
OJGT01000138
149065
Gammaproteobacteria
CCA
Trp
>WENV182579740
OJGT01000126
247088
Gammaproteobacteria
CCA
Trp
>WENV182579688
OJGT01000007
237711
Gammaproteobacteria
GAA
Phe
>WENV182579747
OJGT01000278
149315
Gammaproteobacteria
GAC
Val
>WENV182579718
OJGT01000019
149315
Gammaproteobacteria
GAC
Val
>WENV182579753
OJGT01000454
193275
Gammaproteobacteria
GAT
Ile
>WENV182579694
OJGT01000008
237225
Gammaproteobacteria
GCC
Gly
>WENV182579681
OJGT01000003
10780
Gammaproteobacteria
GCT
Ser
>WENV182579738
OJGT01000102
24067
Gammaproteobacteria
GGA
Ser
>WENV182579716
OJGT01000019
237221
Gammaproteobacteria
GGC
Ala
>WENV182579719
OJGT01000021
146644
Gammaproteobacteria
GGG
Pro
>WENV182579687
OJGT01000006
95866
Gammaproteobacteria
GTA
Tyr
>WENV182579675
OJGT01000001
311624
Gammaproteobacteria
GTG
His
>WENV182579727
OJGT01000037
240197
Gammaproteobacteria
GTT
Asn
>WENV182579739
OJGT01000118
237220
Gammaproteobacteria
GTT
Asn
>WENV182579723
OJGT01000025
19282
Gammaproteobacteria
TGA
Ser
>WENV182579720
OJGT01000021
19282
Gammaproteobacteria
TGA
Ser
>WENV182579746
OJGT01000254
146646
Gammaproteobacteria
TGG
Pro
>WENV182579689
OJGT01000007
249995
Gammaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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