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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182588494
OJHU01000001
182592
Gammaproteobacteria
GAC
Val
>WENV182588496
OJHU01000174
145196
Gammaproteobacteria
CAT
Met
>WENV182588498
OJHU01000207
113631
Gammaproteobacteria
GTA
Tyr
>WENV182588499
OJHU01000207
338534
Gammaproteobacteria
TCC
Gly
>WENV182588502
OJHU01000216
235886
Gammaproteobacteria
TTC
Glu
>WENV182588504
OJHU01000267
16284
Gammaproteobacteria
TGA
Ser
>WENV182588505
OJHU01000308
145369
Gammaproteobacteria
CGG
Pro
>WENV182588516
OJHU01000858
145366
Gammaproteobacteria
ACG
Arg
>WENV182588519
OJHU01001117
174801
Gammaproteobacteria
TGG
Pro
>WENV182588527
OJHU01001362
277725
Gammaproteobacteria
TAC
Val
>WENV182588533
OJHU01001492
277901
Gammaproteobacteria
TGT
Thr
>WENV182588537
OJHU01001511
241136
Gammaproteobacteria
TTG
Gln
>WENV182588545
OJHU01001689
411735
Gammaproteobacteria
GCA
Cys
>WENV182588567
OJHU01003835
147023
Gammaproteobacteria
CAT
Met
>WENV182588569
OJHU01003835
341850
Gammaproteobacteria
TTG
Gln
>WENV182588575
OJHU01005219
235887
Gammaproteobacteria
GTG
His
>WENV182588579
OJHU01005829
262546
Gammaproteobacteria
TGC
Ala
>WENV182588580
OJHU01007327
145368
Gammaproteobacteria
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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