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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182588665
OJHW01000905
17426
Gammaproteobacteria
GCT
Ser
>WENV182588668
OJHW01001060
240619
Gammaproteobacteria
TGT
Thr
>WENV182588672
OJHW01001516
45345
Gammaproteobacteria
GGA
Ser
>WENV182588673
OJHW01001523
249892
Gammaproteobacteria
GTT
Asn
>WENV182588677
OJHW01002074
249995
Gammaproteobacteria
TTT
Lys
>WENV182588690
OJHW01002953
149036
Gammaproteobacteria
CCA
Trp
>WENV182588696
OJHW01003552
240084
Gammaproteobacteria
GGT
Thr
>WENV182588700
OJHW01004531
241136
Gammaproteobacteria
TTG
Gln
>WENV182588703
OJHW01006247
237766
Gammaproteobacteria
TAC
Val
>WENV182588704
OJHW01006247
237766
Gammaproteobacteria
TAC
Val
>WENV182588705
OJHW01006247
237766
Gammaproteobacteria
TAC
Val
>WENV182588709
OJHW01006491
149065
Gammaproteobacteria
CCA
Trp
>WENV182588715
OJHW01008744
154796
Gammaproteobacteria
TCT
Arg
>WENV182588719
OJHW01008811
148442
Gammaproteobacteria
ACG
Arg
>WENV182588720
OJHW01008811
148442
Gammaproteobacteria
ACG
Arg
>WENV182588721
OJHW01009352
193276
Gammaproteobacteria
ACG
Arg
>WENV182588722
OJHW01009352
193276
Gammaproteobacteria
ACG
Arg
>WENV182588725
OJHW01009853
237221
Gammaproteobacteria
GGC
Ala
>WENV182588726
OJHW01009853
238438
Gammaproteobacteria
>WENV182588729
OJHW01010669
158081
Gammaproteobacteria
GAT
Ile
>WENV182588730
OJHW01010669
236029
Gammaproteobacteria
TGC
Ala
>WENV182588731
OJHW01010900
59485
Gammaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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