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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
110 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182591373
OJIO01000001
10850
Gammaproteobacteria
TGA
Ser
>WENV182591379
OJIO01000004
113688
Gammaproteobacteria
GTA
Tyr
>WENV182591383
OJIO01000004
147120
Gammaproteobacteria
CGG
Pro
>WENV182591385
OJIO01000007
289927
Gammaproteobacteria
GAA
Phe
>WENV182591390
OJIO01000012
283840
Gammaproteobacteria
TTC
Glu
>WENV182591391
OJIO01000015
147118
Gammaproteobacteria
GAC
Val
>WENV182591394
OJIO01000018
150648
Gammaproteobacteria
TGG
Pro
>WENV182591406
OJIO01000024
146807
Gammaproteobacteria
TCT
Arg
>WENV182591409
OJIO01000030
341850
Gammaproteobacteria
TTG
Gln
>WENV182591410
OJIO01000030
147023
Gammaproteobacteria
CAT
Met
>WENV182591428
OJIO01000044
277901
Gammaproteobacteria
TGT
Thr
>WENV182591431
OJIO01000048
158083
Gammaproteobacteria
ACG
Arg
>WENV182591433
OJIO01000059
279385
Gammaproteobacteria
TTT
Lys
>WENV182591439
OJIO01000064
273942
Gammaproteobacteria
GCC
Gly
>WENV182591440
OJIO01000064
417674
Gammaproteobacteria
GCA
Cys
>WENV182591442
OJIO01000071
147328
Gammaproteobacteria
CCG
Arg
>WENV182591444
OJIO01000075
152460
Gammaproteobacteria
GGG
Pro
>WENV182591446
OJIO01000079
319098
Gammaproteobacteria
TAC
Val
>WENV182591455
OJIO01000098
319098
Gammaproteobacteria
TAC
Val
>WENV182591456
OJIO01000098
279385
Gammaproteobacteria
TTT
Lys
>WENV182591461
OJIO01000116
151889
Gammaproteobacteria
CAT
Met
>WENV182591470
OJIO01000133
145713
Gammaproteobacteria
CAT
Met
>WENV182591472
OJIO01000140
147114
Gammaproteobacteria
CCT
Arg
>WENV182591476
OJIO01000159
249882
Gammaproteobacteria
GTT
Asn
>WENV182591481
OJIO01000163
290337
Gammaproteobacteria
TAC
Val
>WENV182591489
OJIO01000177
268812
Gammaproteobacteria
GTT
Asn
>WENV182591490
OJIO01000183
312287
Gammaproteobacteria
TGT
Thr
>WENV182591500
OJIO01000219
237438
Gammaproteobacteria
GAA
Phe
>WENV182591504
OJIO01000231
16396
Gammaproteobacteria
TGA
Ser
>WENV182591513
OJIO01000252
241230
Gammaproteobacteria
GAA
Phe
>WENV182591515
OJIO01000271
249882
Gammaproteobacteria
GTT
Asn
>WENV182591516
OJIO01000271
146791
Gammaproteobacteria
GAC
Val
>WENV182591518
OJIO01000272
199984
Gammaproteobacteria
CAT
Met
>WENV182591519
OJIO01000272
268812
Gammaproteobacteria
GTT
Asn
>WENV182591524
OJIO01000285
273942
Gammaproteobacteria
GCC
Gly
>WENV182591525
OJIO01000285
45345
Gammaproteobacteria
GGA
Ser
>WENV182591537
OJIO01000331
147053
Gammaproteobacteria
GTT
Asn
>WENV182591538
OJIO01000333
17426
Gammaproteobacteria
GCT
Ser
>WENV182591539
OJIO01000333
203054
Gammaproteobacteria
ACG
Arg
>WENV182591542
OJIO01000338
147117
Gammaproteobacteria
GTC
Asp
>WENV182591548
OJIO01000372
279385
Gammaproteobacteria
TTT
Lys
>WENV182591549
OJIO01000379
198797
Gammaproteobacteria
TGG
Pro
>WENV182591552
OJIO01000385
319098
Gammaproteobacteria
TAC
Val
>WENV182591557
OJIO01000404
199984
Gammaproteobacteria
CAT
Met
>WENV182591558
OJIO01000417
45345
Gammaproteobacteria
GGA
Ser
>WENV182591570
OJIO01000529
237225
Gammaproteobacteria
GCC
Gly
>WENV182591571
OJIO01000529
413604
Gammaproteobacteria
GCA
Cys
>WENV182591572
OJIO01000529
67366
Gammaproteobacteria
TAA
Leu
>WENV182591573
OJIO01000540
146644
Gammaproteobacteria
GGG
Pro
>WENV182591584
OJIO01000644
277901
Gammaproteobacteria
TGT
Thr
>WENV182591606
OJIO01000714
269248
Gammaproteobacteria
CCA
Trp
>WENV182591608
OJIO01000742
289927
Gammaproteobacteria
GAA
Phe
>WENV182591612
OJIO01000836
241136
Gammaproteobacteria
TTG
Gln
>WENV182591619
OJIO01000865
311624
Gammaproteobacteria
GTG
His
>WENV182591620
OJIO01000865
146646
Gammaproteobacteria
TGG
Pro
>WENV182591621
OJIO01000907
145367
Gammaproteobacteria
GGG
Pro
>WENV182591624
OJIO01000913
158083
Gammaproteobacteria
ACG
Arg
>WENV182591631
OJIO01001029
235452
Gammaproteobacteria
GAA
Phe
>WENV182591634
OJIO01001053
47425
Gammaproteobacteria
GGA
Ser
>WENV182591644
OJIO01001179
16284
Gammaproteobacteria
TGA
Ser
>WENV182591649
OJIO01001239
235886
Gammaproteobacteria
TTC
Glu
>WENV182591662
OJIO01001442
235886
Gammaproteobacteria
TTC
Glu
>WENV182591677
OJIO01001661
149315
Gammaproteobacteria
GAC
Val
>WENV182591683
OJIO01001833
45345
Gammaproteobacteria
GGA
Ser
>WENV182591688
OJIO01001993
175964
Gammaproteobacteria
CAT
Met
>WENV182591692
OJIO01002147
58822
Gammaproteobacteria
CAA
Leu
>WENV182591693
OJIO01002149
58822
Gammaproteobacteria
CAA
Leu
>WENV182591697
OJIO01002229
145367
Gammaproteobacteria
GGG
Pro
>WENV182591698
OJIO01002241
411735
Gammaproteobacteria
GCA
Cys
>WENV182591708
OJIO01002524
59172
Gammaproteobacteria
CAA
Leu
>WENV182591714
OJIO01002672
145365
Gammaproteobacteria
GAC
Val
>WENV182591716
OJIO01002693
149038
Gammaproteobacteria
TGG
Pro
>WENV182591727
OJIO01002964
240619
Gammaproteobacteria
TGT
Thr
>WENV182591731
OJIO01002982
149065
Gammaproteobacteria
CCA
Trp
>WENV182591739
OJIO01003228
145365
Gammaproteobacteria
GAC
Val
>WENV182591740
OJIO01003239
145260
Gammaproteobacteria
CAT
Met
>WENV182591742
OJIO01003284
235884
Gammaproteobacteria
TAC
Val
>WENV182591744
OJIO01003290
237221
Gammaproteobacteria
GGC
Ala
>WENV182591745
OJIO01003290
238438
Gammaproteobacteria
>WENV182591749
OJIO01003608
249995
Gammaproteobacteria
TTT
Lys
>WENV182591750
OJIO01003689
149066
Gammaproteobacteria
CAT
Met
>WENV182591751
OJIO01003689
100592
Gammaproteobacteria
TAG
Leu
>WENV182591752
OJIO01003722
148452
Gammaproteobacteria
CCT
Arg
>WENV182591753
OJIO01003728
14613
Gammaproteobacteria
TGA
Ser
>WENV182591781
OJIO01004743
240197
Gammaproteobacteria
GTT
Asn
>WENV182591783
OJIO01004822
145369
Gammaproteobacteria
CGG
Pro
>WENV182591787
OJIO01004958
147118
Gammaproteobacteria
GAC
Val
>WENV182591810
OJIO01005738
162437
Gammaproteobacteria
TCT
Arg
>WENV182591832
OJIO01006474
250885
Gammaproteobacteria
TGC
Ala
>WENV182591839
OJIO01006882
340801
Gammaproteobacteria
CCT
Arg
>WENV182591849
OJIO01007561
237412
Gammaproteobacteria
TAC
Val
>WENV182591868
OJIO01009486
149036
Gammaproteobacteria
CCA
Trp
>WENV182591882
OJIO01011373
149037
Gammaproteobacteria
GAC
Val
>WENV182591886
OJIO01011771
240084
Gammaproteobacteria
GGT
Thr
>WENV182591901
OJIO01013798
20500
Gammaproteobacteria
GGA
Ser
>WENV182591910
OJIO01015831
421020
Gammaproteobacteria
GCA
Cys
>WENV182591915
OJIO01016875
195303
Gammaproteobacteria
GAT
Ile
>WENV182591930
OJIO01018904
236029
Gammaproteobacteria
TGC
Ala
>WENV182591938
OJIO01020317
189955
Gammaproteobacteria
GAT
Ile
>WENV182591944
OJIO01020794
235887
Gammaproteobacteria
GTG
His
>WENV182591957
OJIO01025006
411767
Gammaproteobacteria
TCC
Gly
>WENV182591958
OJIO01025006
377665
Gammaproteobacteria
GGT
Thr
>WENV182591960
OJIO01025369
236027
Gammaproteobacteria
GTT
Asn
>WENV182591988
OJIO01032428
10780
Gammaproteobacteria
GCT
Ser
>WENV182591992
OJIO01034696
19282
Gammaproteobacteria
TGA
Ser
>WENV182591999
OJIO01036853
145368
Gammaproteobacteria
CCT
Arg
>WENV182592016
OJIO01044819
59830
Gammaproteobacteria
CAA
Leu
>WENV182592018
OJIO01045080
174801
Gammaproteobacteria
TGG
Pro
>WENV182592023
OJIO01046162
95973
Gammaproteobacteria
CAA
Leu
>WENV182592024
OJIO01046163
6972
Gammaproteobacteria
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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