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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182593287
OJIT01025933
180719
Gammaproteobacteria
ACG
Arg
>WENV182593288
OJIT01025933
180719
Gammaproteobacteria
ACG
Arg
>WENV182593166
OJIT01001657
176662
Gammaproteobacteria
ACG
Arg
>WENV182593167
OJIT01001657
176662
Gammaproteobacteria
ACG
Arg
>WENV182593142
OJIT01000954
190706
Gammaproteobacteria
ACG
Arg
>WENV182593132
OJIT01000350
74115
Gammaproteobacteria
CAG
Leu
>WENV182593136
OJIT01000387
197233
Gammaproteobacteria
CAT
Met
>WENV182593290
OJIT01026494
180718
Gammaproteobacteria
CAT
Met
>WENV182593121
OJIT01000023
353123
Gammaproteobacteria
CCA
Trp
>WENV182593160
OJIT01001331
353123
Gammaproteobacteria
CCA
Trp
>WENV182593174
OJIT01002022
353123
Gammaproteobacteria
CCA
Trp
>WENV182593220
OJIT01007045
209464
Gammaproteobacteria
CCG
Arg
>WENV182593223
OJIT01007980
178541
Gammaproteobacteria
CGG
Pro
>WENV182593233
OJIT01009886
176665
Gammaproteobacteria
CGG
Pro
>WENV182593188
OJIT01003061
346373
Gammaproteobacteria
GAA
Phe
>WENV182593262
OJIT01017477
283224
Gammaproteobacteria
GAA
Phe
>WENV182593125
OJIT01000100
176661
Gammaproteobacteria
GAC
Val
>WENV182593161
OJIT01001376
73501
Gammaproteobacteria
GAG
Leu
>WENV182593231
OJIT01009224
176301
Gammaproteobacteria
GAT
Ile
>WENV182593141
OJIT01000954
8667
Gammaproteobacteria
GCT
Ser
>WENV182593202
OJIT01004653
176663
Gammaproteobacteria
GGG
Pro
>WENV182593201
OJIT01004385
184457
Gammaproteobacteria
GGG
Pro
>WENV182593159
OJIT01001331
443066
Gammaproteobacteria
GGT
Thr
>WENV182593230
OJIT01009167
317785
Gammaproteobacteria
GGT
Thr
>WENV182593264
OJIT01017477
118078
Gammaproteobacteria
GTA
Tyr
>WENV182593157
OJIT01001331
140861
Gammaproteobacteria
GTA
Tyr
>WENV182593148
OJIT01001178
281283
Gammaproteobacteria
GTG
His
>WENV182593255
OJIT01015828
318157
Gammaproteobacteria
GTT
Asn
>WENV182593154
OJIT01001203
20273
Gammaproteobacteria
TGA
Ser
>WENV182593146
OJIT01001178
229289
Gammaproteobacteria
TGG
Pro
>WENV182593261
OJIT01017477
283225
Gammaproteobacteria
TGT
Thr
>WENV182593256
OJIT01015987
282018
Gammaproteobacteria
TGT
Thr
>WENV182593119
OJIT01000020
281282
Gammaproteobacteria
TTC
Glu
>WENV182593292
OJIT01026494
401883
Gammaproteobacteria
TTG
Gln
>WENV182593135
OJIT01000387
444310
Gammaproteobacteria
TTG
Gln
>WENV182593134
OJIT01000352
329164
Gammaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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