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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182856810
OKNQ01000224
237967
Gammaproteobacteria
TTT
Lys
>WENV182856822
OKNQ01000293
163526
Gammaproteobacteria
TCT
Arg
>WENV182856814
OKNQ01000237
237968
Gammaproteobacteria
CTT
Lys
>WENV182856812
OKNQ01000230
45161
Gammaproteobacteria
TGA
Ser
>WENV182856819
OKNQ01000264
159154
Gammaproteobacteria
GAC
Val
>WENV182856766
OKNQ01000063
174545
Gammaproteobacteria
CAT
Met
>WENV182856767
OKNQ01000064
412359
Gammaproteobacteria
CCC
Gly
>WENV182856831
OKNQ01000395
59216
Gammaproteobacteria
TAA
Leu
>WENV182856830
OKNQ01000395
59216
Gammaproteobacteria
TAA
Leu
>WENV182856805
OKNQ01000188
147282
Gammaproteobacteria
GGG
Pro
>WENV182856829
OKNQ01000395
412278
Gammaproteobacteria
GCA
Cys
>WENV182856841
OKNQ01000647
45162
Gammaproteobacteria
GGA
Ser
>WENV182856836
OKNQ01000566
96693
Gammaproteobacteria
CAA
Leu
>WENV182856821
OKNQ01000293
144928
Gammaproteobacteria
TCG
Arg
>WENV182856817
OKNQ01000259
45125
Gammaproteobacteria
TGA
Ser
>WENV182856803
OKNQ01000155
161470
Gammaproteobacteria
TCT
Arg
>WENV182856794
OKNQ01000129
3243
Gammaproteobacteria
>WENV182856837
OKNQ01000571
269720
Gammaproteobacteria
GTT
Asn
>WENV182856835
OKNQ01000539
339721
Gammaproteobacteria
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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