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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
7 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182861861
OKPI01000008
242463
Gammaproteobacteria
TCT
Arg
>WENV182861860
OKPI01000008
176187
Gammaproteobacteria
TCG
Arg
>WENV182861885
OKPI01000027
65536
Gammaproteobacteria
GGA
Ser
>WENV182861886
OKPI01000029
473724
Gammaproteobacteria
CCT
Arg
>WENV182861898
OKPI01000053
96714
Gammaproteobacteria
CAG
Leu
>WENV182861901
OKPI01000072
289242
Gammaproteobacteria
TGT
Thr
>WENV182861900
OKPI01000072
398951
Gammaproteobacteria
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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