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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
59 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183054787
OLGU01003851
73123
Gammaproteobacteria
CAA
Leu
>WENV183054918
OLGU01023230
196766
Gammaproteobacteria
GTT
Asn
>WENV183054528
OLGU01000030
21535
Gammaproteobacteria
GCT
Ser
>WENV183054626
OLGU01000473
284132
Gammaproteobacteria
TTT
Lys
>WENV183054724
OLGU01001933
281275
Gammaproteobacteria
TGT
Thr
>WENV183054712
OLGU01001515
20273
Gammaproteobacteria
TGA
Ser
>WENV183054599
OLGU01000301
184446
Gammaproteobacteria
GAC
Val
>WENV183054815
OLGU01004807
328691
Gammaproteobacteria
GGT
Thr
>WENV183054727
OLGU01001933
281276
Gammaproteobacteria
GGT
Thr
>WENV183054674
OLGU01001044
178469
Gammaproteobacteria
CAT
Met
>WENV183054519
OLGU01000021
20407
Gammaproteobacteria
TGA
Ser
>WENV183054521
OLGU01000023
20407
Gammaproteobacteria
TGA
Ser
>WENV183054533
OLGU01000036
283222
Gammaproteobacteria
GTG
His
>WENV183054607
OLGU01000338
178472
Gammaproteobacteria
CAT
Met
>WENV183054587
OLGU01000209
283223
Gammaproteobacteria
TTT
Lys
>WENV183054726
OLGU01001933
399250
Gammaproteobacteria
TCC
Gly
>WENV183054708
OLGU01001482
229289
Gammaproteobacteria
TGG
Pro
>WENV183054773
OLGU01003180
281282
Gammaproteobacteria
TTC
Glu
>WENV183054833
OLGU01007394
329164
Gammaproteobacteria
TTT
Lys
>WENV183054811
OLGU01004660
176663
Gammaproteobacteria
GGG
Pro
>WENV183054666
OLGU01000925
178471
Gammaproteobacteria
GTT
Asn
>WENV183054609
OLGU01000338
441770
Gammaproteobacteria
TTG
Gln
>WENV183054768
OLGU01003027
480516
Gammaproteobacteria
GCA
Cys
>WENV183054722
OLGU01001897
338424
Gammaproteobacteria
TAC
Val
>WENV183054547
OLGU01000092
178473
Gammaproteobacteria
TGG
Pro
>WENV183054542
OLGU01000062
178466
Gammaproteobacteria
CCA
Trp
>WENV183054620
OLGU01000410
178466
Gammaproteobacteria
CCA
Trp
>WENV183054753
OLGU01002668
176661
Gammaproteobacteria
GAC
Val
>WENV183054608
OLGU01000338
118206
Gammaproteobacteria
TAG
Leu
>WENV183054725
OLGU01001933
140800
Gammaproteobacteria
GTA
Tyr
>WENV183054834
OLGU01007460
176545
Gammaproteobacteria
CAT
Met
>WENV183054817
OLGU01005137
118204
Gammaproteobacteria
CAA
Leu
>WENV183054734
OLGU01002117
401684
Gammaproteobacteria
CCT
Arg
>WENV183054601
OLGU01000312
283226
Gammaproteobacteria
TAC
Val
>WENV183054714
OLGU01001615
73481
Gammaproteobacteria
TAA
Leu
>WENV183054858
OLGU01010688
178467
Gammaproteobacteria
GGG
Pro
>WENV183054689
OLGU01001210
306288
Gammaproteobacteria
GCC
Gly
>WENV183054713
OLGU01001615
491391
Gammaproteobacteria
GCA
Cys
>WENV183054592
OLGU01000257
176664
Gammaproteobacteria
CCT
Arg
>WENV183054669
OLGU01000963
346373
Gammaproteobacteria
GAA
Phe
>WENV183054879
OLGU01013594
400373
Gammaproteobacteria
CCG
Arg
>WENV183054530
OLGU01000032
283225
Gammaproteobacteria
TGT
Thr
>WENV183054602
OLGU01000312
282683
Gammaproteobacteria
GGC
Ala
>WENV183054627
OLGU01000473
29695
Gammaproteobacteria
GGA
Ser
>WENV183054877
OLGU01013223
180680
Gammaproteobacteria
GAC
Val
>WENV183054782
OLGU01003537
317792
Gammaproteobacteria
TGC
Ala
>WENV183054777
OLGU01003323
118207
Gammaproteobacteria
GAG
Leu
>WENV183054732
OLGU01002080
176665
Gammaproteobacteria
CGG
Pro
>WENV183054534
OLGU01000040
8605
Gammaproteobacteria
>WENV183054754
OLGU01002725
285547
Gammaproteobacteria
TTG
Gln
>WENV183054531
OLGU01000032
283224
Gammaproteobacteria
GAA
Phe
>WENV183054543
OLGU01000069
400372
Gammaproteobacteria
CCT
Arg
>WENV183054780
OLGU01003400
400372
Gammaproteobacteria
CCT
Arg
>WENV183054816
OLGU01005009
14091
Gammaproteobacteria
TGA
Ser
>WENV183054710
OLGU01001482
281283
Gammaproteobacteria
GTG
His
>WENV183054520
OLGU01000021
21947
Gammaproteobacteria
TGA
Ser
>WENV183054532
OLGU01000034
118205
Gammaproteobacteria
GTA
Tyr
>WENV183054546
OLGU01000085
118341
Gammaproteobacteria
CAA
Leu
>WENV183054928
OLGU01025940
180679
Gammaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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