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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183058266
OLHP01000082
359029
Gammaproteobacteria
GGT
Thr
>WENV183058282
OLHP01000764
249995
Gammaproteobacteria
TTT
Lys
>WENV183058283
OLHP01000822
45345
Gammaproteobacteria
GGA
Ser
>WENV183058291
OLHP01002261
146646
Gammaproteobacteria
TGG
Pro
>WENV183058293
OLHP01002261
146646
Gammaproteobacteria
TGG
Pro
>WENV183058294
OLHP01002338
238370
Gammaproteobacteria
TTT
Lys
>WENV183058295
OLHP01002628
417094
Gammaproteobacteria
TCC
Gly
>WENV183058297
OLHP01002986
65417
Gammaproteobacteria
GAG
Leu
>WENV183058301
OLHP01004020
149065
Gammaproteobacteria
CCA
Trp
>WENV183058302
OLHP01004237
65417
Gammaproteobacteria
GAG
Leu
>WENV183058304
OLHP01004548
193275
Gammaproteobacteria
GAT
Ile
>WENV183058305
OLHP01004571
339731
Gammaproteobacteria
CTG
Gln
>WENV183058306
OLHP01005078
115067
Gammaproteobacteria
GTA
Tyr
>WENV183058312
OLHP01006110
237685
Gammaproteobacteria
>WENV183058315
OLHP01006603
163552
Gammaproteobacteria
TGG
Pro
>WENV183058313
OLHP01006603
162182
Gammaproteobacteria
CCG
Arg
>WENV183058318
OLHP01007602
235490
Gammaproteobacteria
GGT
Thr
>WENV183058317
OLHP01007602
379274
Gammaproteobacteria
TCC
Gly
>WENV183058321
OLHP01008405
249963
Gammaproteobacteria
GGT
Thr
>WENV183058326
OLHP01011119
95970
Gammaproteobacteria
GAG
Leu
>WENV183058328
OLHP01011508
245151
Gammaproteobacteria
GTG
His
>WENV183058336
OLHP01014001
193276
Gammaproteobacteria
ACG
Arg
>WENV183058335
OLHP01014001
193276
Gammaproteobacteria
ACG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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