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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183370777
OLXV01001260
144736
Gammaproteobacteria
ACG
Arg
>WENV183370867
OLXV01001920
310681
Gammaproteobacteria
GTG
His
>WENV183370909
OLXV01002479
238559
Gammaproteobacteria
CTT
Lys
>WENV183370980
OLXV01003768
27259
Gammaproteobacteria
GGA
Ser
>WENV183371127
OLXV01007255
45932
Gammaproteobacteria
TGA
Ser
>WENV183371344
OLXV01018526
95735
Gammaproteobacteria
CAA
Leu
>WENV183371348
OLXV01018779
3243
Gammaproteobacteria
>WENV183371361
OLXV01019711
73589
Gammaproteobacteria
CAG
Leu
>WENV183371360
OLXV01019711
74241
Gammaproteobacteria
CAG
Leu
>WENV183371414
OLXV01025454
195524
Gammaproteobacteria
TCT
Arg
>WENV183371540
OLXV01043123
45742
Gammaproteobacteria
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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