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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183512701
OMKS01001160
74766
Gammaproteobacteria
CAG
Leu
>WENV183513187
OMKS01003223
178175
Gammaproteobacteria
ACG
Arg
>WENV183513546
OMKS01005847
312832
Gammaproteobacteria
TGT
Thr
>WENV183516332
OMKS01160875
312832
Gammaproteobacteria
TGT
Thr
>WENV183512651
OMKS01000983
282922
Gammaproteobacteria
GAA
Phe
>WENV183513612
OMKS01006298
118414
Gammaproteobacteria
TAG
Leu
>WENV183514821
OMKS01033454
176301
Gammaproteobacteria
GAT
Ile
>WENV183516073
OMKS01127518
176301
Gammaproteobacteria
GAT
Ile
>WENV183512598
OMKS01000843
176518
Gammaproteobacteria
CAT
Met
>WENV183512941
OMKS01001910
300318
Gammaproteobacteria
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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