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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
69 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183522162
OMOM01000328
282684
Gammaproteobacteria
TTC
Glu
>WENV183522107
OMOM01000098
73123
Gammaproteobacteria
CAA
Leu
>WENV183522358
OMOM01008646
196766
Gammaproteobacteria
GTT
Asn
>WENV183522154
OMOM01000273
281440
Gammaproteobacteria
TGT
Thr
>WENV183522313
OMOM01002802
183804
Gammaproteobacteria
CAT
Met
>WENV183522204
OMOM01000830
180719
Gammaproteobacteria
ACG
Arg
>WENV183522223
OMOM01000970
281275
Gammaproteobacteria
TGT
Thr
>WENV183522218
OMOM01000918
282687
Gammaproteobacteria
GCC
Gly
>WENV183522173
OMOM01000402
20273
Gammaproteobacteria
TGA
Ser
>WENV183522161
OMOM01000328
302240
Gammaproteobacteria
GGC
Ala
>WENV183522237
OMOM01001026
180053
Gammaproteobacteria
CAT
Met
>WENV183522094
OMOM01000065
304066
Gammaproteobacteria
TTT
Lys
>WENV183522122
OMOM01000133
304066
Gammaproteobacteria
TTT
Lys
>WENV183522152
OMOM01000250
304066
Gammaproteobacteria
TTT
Lys
>WENV183522310
OMOM01002784
401883
Gammaproteobacteria
TTG
Gln
>WENV183522215
OMOM01000847
118078
Gammaproteobacteria
GTA
Tyr
>WENV183522224
OMOM01000970
140925
Gammaproteobacteria
GTA
Tyr
>WENV183522294
OMOM01002116
285584
Gammaproteobacteria
TTT
Lys
>WENV183522184
OMOM01000550
281282
Gammaproteobacteria
TTC
Glu
>WENV183522181
OMOM01000497
180717
Gammaproteobacteria
CCA
Trp
>WENV183522255
OMOM01001443
180717
Gammaproteobacteria
CCA
Trp
>WENV183522234
OMOM01000995
285953
Gammaproteobacteria
CCT
Arg
>WENV183522202
OMOM01000810
178006
Gammaproteobacteria
GGG
Pro
>WENV183522186
OMOM01000570
176663
Gammaproteobacteria
GGG
Pro
>WENV183522384
OMOM01015667
292006
Gammaproteobacteria
TGC
Ala
>WENV183522137
OMOM01000170
480516
Gammaproteobacteria
GCA
Cys
>WENV183522080
OMOM01000051
181513
Gammaproteobacteria
TGG
Pro
>WENV183522116
OMOM01000126
181513
Gammaproteobacteria
TGG
Pro
>WENV183522329
OMOM01003686
182472
Gammaproteobacteria
GTC
Asp
>WENV183522241
OMOM01001116
291402
Gammaproteobacteria
GTG
His
>WENV183522118
OMOM01000126
281668
Gammaproteobacteria
TTT
Lys
>WENV183522049
OMOM01000012
280812
Gammaproteobacteria
GAA
Phe
>WENV183522127
OMOM01000140
280812
Gammaproteobacteria
GAA
Phe
>WENV183522052
OMOM01000017
176661
Gammaproteobacteria
GAC
Val
>WENV183522128
OMOM01000146
184276
Gammaproteobacteria
ACG
Arg
>WENV183522213
OMOM01000842
180998
Gammaproteobacteria
GAC
Val
>WENV183522383
OMOM01015667
183701
Gammaproteobacteria
GAT
Ile
>WENV183522053
OMOM01000017
312181
Gammaproteobacteria
TTT
Lys
>WENV183522071
OMOM01000043
178169
Gammaproteobacteria
GAC
Val
>WENV183522156
OMOM01000277
178169
Gammaproteobacteria
GAC
Val
>WENV183522246
OMOM01001248
281279
Gammaproteobacteria
TAC
Val
>WENV183522078
OMOM01000048
284865
Gammaproteobacteria
>WENV183522106
OMOM01000094
284865
Gammaproteobacteria
>WENV183522102
OMOM01000079
176664
Gammaproteobacteria
CCT
Arg
>WENV183522214
OMOM01000843
20620
Gammaproteobacteria
TGA
Ser
>WENV183522315
OMOM01002832
176301
Gammaproteobacteria
GAT
Ile
>WENV183522210
OMOM01000840
56623
Gammaproteobacteria
GGA
Ser
>WENV183522235
OMOM01001015
56623
Gammaproteobacteria
GGA
Ser
>WENV183522104
OMOM01000089
176665
Gammaproteobacteria
CGG
Pro
>WENV183522231
OMOM01000989
402799
Gammaproteobacteria
TTG
Gln
>WENV183522236
OMOM01001017
13469
Gammaproteobacteria
GCT
Ser
>WENV183522172
OMOM01000396
285955
Gammaproteobacteria
GTT
Asn
>WENV183522194
OMOM01000648
178009
Gammaproteobacteria
TGG
Pro
>WENV183522144
OMOM01000231
201377
Gammaproteobacteria
TGG
Pro
>WENV183522341
OMOM01006190
14091
Gammaproteobacteria
TGA
Ser
>WENV183522070
OMOM01000043
296680
Gammaproteobacteria
GTT
Asn
>WENV183522178
OMOM01000466
120800
Gammaproteobacteria
CAA
Leu
>WENV183522146
OMOM01000231
281283
Gammaproteobacteria
GTG
His
>WENV183522164
OMOM01000337
285954
Gammaproteobacteria
GAA
Phe
>WENV183522228
OMOM01000971
118640
Gammaproteobacteria
TAG
Leu
>WENV183522197
OMOM01000664
176478
Gammaproteobacteria
CAT
Met
>WENV183522374
OMOM01011848
176478
Gammaproteobacteria
CAT
Met
>WENV183522170
OMOM01000388
141076
Gammaproteobacteria
GTA
Tyr
>WENV183522199
OMOM01000752
141076
Gammaproteobacteria
GTA
Tyr
>WENV183522257
OMOM01001459
282902
Gammaproteobacteria
TGT
Thr
>WENV183522270
OMOM01001761
282902
Gammaproteobacteria
TGT
Thr
>WENV183522208
OMOM01000834
285826
Gammaproteobacteria
GGT
Thr
>WENV183522227
OMOM01000971
190582
Gammaproteobacteria
CAT
Met
>WENV183522354
OMOM01008297
180679
Gammaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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