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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183614837
OOEA01002839
180052
Gammaproteobacteria
CCT
Arg
>WENV183614974
OOEA01022681
73123
Gammaproteobacteria
CAA
Leu
>WENV183615031
OOEA01033055
183784
Gammaproteobacteria
ACG
Arg
>WENV183615140
OOEA01072312
20273
Gammaproteobacteria
TGA
Ser
>WENV183614933
OOEA01015050
281276
Gammaproteobacteria
GGT
Thr
>WENV183614906
OOEA01008962
180053
Gammaproteobacteria
CAT
Met
>WENV183614767
OOEA01000295
73863
Gammaproteobacteria
CAG
Leu
>WENV183614958
OOEA01020958
304066
Gammaproteobacteria
TTT
Lys
>WENV183614932
OOEA01015050
399250
Gammaproteobacteria
TCC
Gly
>WENV183614782
OOEA01000693
140925
Gammaproteobacteria
GTA
Tyr
>WENV183615079
OOEA01051845
296670
Gammaproteobacteria
TGT
Thr
>WENV183615253
OOEA01144966
178471
Gammaproteobacteria
GTT
Asn
>WENV183614845
OOEA01003705
317782
Gammaproteobacteria
TAC
Val
>WENV183615249
OOEA01142045
20487
Gammaproteobacteria
TGA
Ser
>WENV183615220
OOEA01114700
281279
Gammaproteobacteria
TAC
Val
>WENV183615203
OOEA01106678
283226
Gammaproteobacteria
TAC
Val
>WENV183615103
OOEA01057202
179136
Gammaproteobacteria
GAC
Val
>WENV183615163
OOEA01085484
73481
Gammaproteobacteria
TAA
Leu
>WENV183615162
OOEA01085484
289386
Gammaproteobacteria
GCC
Gly
>WENV183614886
OOEA01006525
176664
Gammaproteobacteria
CCT
Arg
>WENV183615200
OOEA01106078
283225
Gammaproteobacteria
TGT
Thr
>WENV183614788
OOEA01000815
317792
Gammaproteobacteria
TGC
Ala
>WENV183614872
OOEA01005478
56623
Gammaproteobacteria
GGA
Ser
>WENV183615201
OOEA01106078
283224
Gammaproteobacteria
GAA
Phe
>WENV183615250
OOEA01142487
118205
Gammaproteobacteria
GTA
Tyr
>WENV183614978
OOEA01022885
118640
Gammaproteobacteria
TAG
Leu
>WENV183614781
OOEA01000693
282902
Gammaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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