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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183616850
OOEE01004389
331330
Gammaproteobacteria
TAC
Val
>WENV183616844
OOEE01003880
297858
Gammaproteobacteria
TGC
Ala
>WENV183617430
OOEE01255880
284132
Gammaproteobacteria
TTT
Lys
>WENV183617104
OOEE01059252
281275
Gammaproteobacteria
TGT
Thr
>WENV183617107
OOEE01059252
281276
Gammaproteobacteria
GGT
Thr
>WENV183617320
OOEE01172476
311084
Gammaproteobacteria
GCC
Gly
>WENV183616750
OOEE01000192
357066
Gammaproteobacteria
TGC
Ala
>WENV183616771
OOEE01000685
74416
Gammaproteobacteria
TAA
Leu
>WENV183616896
OOEE01008146
176069
Gammaproteobacteria
TCT
Arg
>WENV183616730
OOEE01000016
229522
Gammaproteobacteria
ACG
Arg
>WENV183616839
OOEE01003644
297790
Gammaproteobacteria
TGC
Ala
>WENV183617154
OOEE01076125
330451
Gammaproteobacteria
TTG
Gln
>WENV183617105
OOEE01059252
140800
Gammaproteobacteria
GTA
Tyr
>WENV183616860
OOEE01004593
290045
Gammaproteobacteria
GGT
Thr
>WENV183617012
OOEE01028660
179136
Gammaproteobacteria
GAC
Val
>WENV183616893
OOEE01007874
481678
Gammaproteobacteria
GCA
Cys
>WENV183617148
OOEE01073739
355552
Gammaproteobacteria
TTC
Glu
>WENV183617013
OOEE01028907
177028
Gammaproteobacteria
CAT
Met
>WENV183616838
OOEE01003644
176301
Gammaproteobacteria
GAT
Ile
>WENV183617435
OOEE01273827
176301
Gammaproteobacteria
GAT
Ile
>WENV183616752
OOEE01000192
317792
Gammaproteobacteria
TGC
Ala
>WENV183616775
OOEE01000843
118640
Gammaproteobacteria
TAG
Leu
>WENV183616788
OOEE01001070
118640
Gammaproteobacteria
TAG
Leu
>WENV183616857
OOEE01004593
282902
Gammaproteobacteria
TGT
Thr
>WENV183616774
OOEE01000843
190582
Gammaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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