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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183618504
OOFO01003518
245770
Gammaproteobacteria
TTT
Lys
>WENV183618364
OOFO01000084
17426
Gammaproteobacteria
GCT
Ser
>WENV183618764
OOFO01040150
147647
Gammaproteobacteria
CAT
Met
>WENV183618576
OOFO01009052
237211
Gammaproteobacteria
GGC
Ala
>WENV183618543
OOFO01005647
145713
Gammaproteobacteria
CAT
Met
>WENV183618778
OOFO01045920
145713
Gammaproteobacteria
CAT
Met
>WENV183618792
OOFO01049407
145713
Gammaproteobacteria
CAT
Met
>WENV183618511
OOFO01003995
238433
Gammaproteobacteria
TTC
Glu
>WENV183618588
OOFO01009501
243485
Gammaproteobacteria
TGT
Thr
>WENV183618368
OOFO01000102
237421
Gammaproteobacteria
TGT
Thr
>WENV183618479
OOFO01002525
157977
Gammaproteobacteria
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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